Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59298 | Canola | nucleus | 96.79 | 96.55 |
| AT5G47440.1 | Thale cress | nucleus | 81.48 | 81.28 |
| Bra026246.1-P | Field mustard | nucleus | 72.84 | 73.2 |
| KRH28119 | Soybean | nucleus | 51.11 | 52.94 |
| KRH04152 | Soybean | nucleus | 50.37 | 51.91 |
| PGSC0003DMT400012161 | Potato | nucleus | 48.64 | 50.51 |
| KRH77342 | Soybean | cytosol, endoplasmic reticulum, nucleus | 48.64 | 50.38 |
| KRH57434 | Soybean | nucleus | 48.89 | 50.25 |
| Solyc08g078500.2.1 | Tomato | cytosol | 48.15 | 50.0 |
| GSMUA_Achr8P11040_001 | Banana | cytosol | 37.78 | 45.67 |
| GSMUA_Achr11P... | Banana | nucleus | 42.22 | 43.18 |
| TraesCS6A01G250400.1 | Wheat | cytosol | 40.0 | 42.08 |
| TraesCS6B01G275000.1 | Wheat | cytosol | 39.75 | 41.71 |
| HORVU0Hr1G027000.1 | Barley | cytosol | 39.75 | 41.28 |
| HORVU0Hr1G032140.1 | Barley | cytosol | 39.75 | 41.28 |
| TraesCS6D01G232200.2 | Wheat | cytosol | 39.75 | 41.28 |
| Os10t0560000-01 | Rice | cytosol | 38.27 | 40.9 |
| HORVU6Hr1G062990.1 | Barley | cytosol | 39.75 | 40.35 |
| TraesCS1A01G220700.1 | Wheat | cytosol | 38.02 | 40.1 |
| TraesCS1B01G234200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 37.53 | 39.58 |
| Zm00001d000175_P001 | Maize | plastid | 38.27 | 39.04 |
| HORVU1Hr1G056150.4 | Barley | cytosol, nucleus | 36.79 | 38.9 |
| TraesCS4D01G363600.1 | Wheat | mitochondrion, nucleus | 37.53 | 38.38 |
| TraesCS3A01G147100.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 36.3 | 38.18 |
| KXG31087 | Sorghum | nucleus | 39.75 | 37.7 |
| Bra038497.1-P | Field mustard | nucleus | 40.0 | 37.59 |
| TraesCS5A01G540500.1 | Wheat | cytosol | 34.32 | 37.47 |
| EER94492 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 37.78 | 37.23 |
| Zm00001d029886_P001 | Maize | vacuole | 36.3 | 37.12 |
| TraesCS4B01G373700.1 | Wheat | nucleus | 36.79 | 37.06 |
| TraesCS1D01G222200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 37.53 | 36.63 |
| Zm00001d051361_P001 | Maize | plastid | 38.77 | 36.6 |
| TraesCS5A01G540300.1 | Wheat | extracellular | 36.79 | 36.52 |
| Bra023803.1-P | Field mustard | cytosol | 31.6 | 27.83 |
| Bra033702.1-P | Field mustard | cytosol, plastid | 29.14 | 27.76 |
| Bra036892.1-P | Field mustard | nucleus | 31.85 | 27.56 |
| Bra039719.1-P | Field mustard | nucleus | 31.36 | 27.31 |
| Bra011382.1-P | Field mustard | cytosol | 28.64 | 27.17 |
| Bra036001.1-P | Field mustard | nucleus | 30.12 | 27.05 |
| Bra040444.1-P | Field mustard | plastid | 29.63 | 24.69 |
| Bra002698.1-P | Field mustard | cytosol | 23.7 | 23.53 |
| Bra020413.1-P | Field mustard | cytosol | 23.7 | 23.24 |
Protein Annotations
Description
AT5G47440 (E=8e-141) | phosphoinositide binding
Coordinates
chrA06:+:24332832..24334431
Molecular Weight (calculated)
44850.3 Da
IEP (calculated)
9.545
GRAVY (calculated)
-0.508
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGRSYLDWN ESSSSLFGSE NLEEELEVVT VRAEEVFSRI PQPQTPRESM KFLSRSWSLS ASEISKALAH KQSQHQSLST VSYNSPNVFF QDPAANPLMA
101: GKIMNSSGKR KSGRLSKWFH QKQHTNPNTM RNPKRKDKAR VERAHVHSAV SIAALAAGLA SVTSEKSCSK ESGSMMTLAL ASATELLASH CIEMAEQAGA
201: DRECVAATVR SSIDIHKPSD LTTLTAAAAT ALRGEAALKA RQPKEARKNA TITPCERSFS DSSWTANFQF RFDEPNLPLE GDLVQCAQNG AHRLKRVCVY
301: INNKSQVMIK LKSKHIGGTF SKKIKCVVYG VCDEISAWPY SKDRENSEDV YFGLKTGQGL LEFKCKSKTQ KQRWVAGIQS TLRQVTCLEA DKCSLESLSL
401: SDRMR
101: GKIMNSSGKR KSGRLSKWFH QKQHTNPNTM RNPKRKDKAR VERAHVHSAV SIAALAAGLA SVTSEKSCSK ESGSMMTLAL ASATELLASH CIEMAEQAGA
201: DRECVAATVR SSIDIHKPSD LTTLTAAAAT ALRGEAALKA RQPKEARKNA TITPCERSFS DSSWTANFQF RFDEPNLPLE GDLVQCAQNG AHRLKRVCVY
301: INNKSQVMIK LKSKHIGGTF SKKIKCVVYG VCDEISAWPY SKDRENSEDV YFGLKTGQGL LEFKCKSKTQ KQRWVAGIQS TLRQVTCLEA DKCSLESLSL
401: SDRMR
001: MEGGFYSDWN DSSSSLFGSE NPEHELEEGN VRSEEIVSQI PQPQTPREPM KFLSRSWSLS ASEISKALAQ KQRQQRDLFS VSQNSPRGFF QDVAADPLMA
101: ENIMNSAGTR RSGRLSKWFH HKQHTNPSTM RIPRKKDKAR VQKAHVHSAV SIAALAAGLA SVTSEESCSK ESCSMMALAL ASATELLASH CIDMAEQAGA
201: DHTCVASTVR SSVDIHSPGD LMTLTAAAAT ALRGEAALKV RQPKESRKNA TITPCERSFS DSHWPGENCQ FRLEEPNLPL EGELVQCARN GLQRNKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEISAWP CRKERENSEE VYFGLKTGQG LLEFKCKSKI QKQRWVAGIQ SNLRLVSCLE AAKCSLESLS
401: LSNRMR
101: ENIMNSAGTR RSGRLSKWFH HKQHTNPSTM RIPRKKDKAR VQKAHVHSAV SIAALAAGLA SVTSEESCSK ESCSMMALAL ASATELLASH CIDMAEQAGA
201: DHTCVASTVR SSVDIHSPGD LMTLTAAAAT ALRGEAALKV RQPKESRKNA TITPCERSFS DSHWPGENCQ FRLEEPNLPL EGELVQCARN GLQRNKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEISAWP CRKERENSEE VYFGLKTGQG LLEFKCKSKI QKQRWVAGIQ SNLRLVSCLE AAKCSLESLS
401: LSNRMR
Arabidopsis Description
At5g47440 [Source:UniProtKB/TrEMBL;Acc:Q9FGL4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.