Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G232200.2 | Wheat | cytosol | 97.66 | 96.41 |
| TraesCS6B01G275000.1 | Wheat | cytosol | 96.62 | 96.37 |
| HORVU0Hr1G032140.1 | Barley | cytosol | 95.58 | 94.36 |
| HORVU0Hr1G027000.1 | Barley | cytosol | 95.58 | 94.36 |
| HORVU6Hr1G062990.1 | Barley | cytosol | 95.58 | 92.23 |
| KXG31087 | Sorghum | nucleus | 75.84 | 68.38 |
| Zm00001d051361_P001 | Maize | plastid | 74.55 | 66.9 |
| TraesCS1A01G220700.1 | Wheat | cytosol | 52.21 | 52.34 |
| TraesCS5A01G540500.1 | Wheat | cytosol | 48.83 | 50.67 |
| TraesCS3A01G147100.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 50.65 | 50.65 |
| TraesCS5A01G540300.1 | Wheat | extracellular | 51.69 | 48.77 |
| KRH28119 | Soybean | nucleus | 44.42 | 43.73 |
| CDY64500 | Canola | cytosol | 45.19 | 43.18 |
| KRH04152 | Soybean | nucleus | 43.9 | 43.0 |
| PGSC0003DMT400012161 | Potato | nucleus | 43.38 | 42.82 |
| CDY65120 | Canola | cytosol | 44.68 | 42.68 |
| Solyc08g078500.2.1 | Tomato | cytosol | 43.12 | 42.56 |
| CDY09634 | Canola | nucleus | 45.19 | 42.54 |
| AT4G17350.1 | Thale cress | cytosol | 44.68 | 42.47 |
| KRH77342 | Soybean | cytosol, endoplasmic reticulum, nucleus | 43.12 | 42.46 |
| Bra026246.1-P | Field mustard | nucleus | 44.42 | 42.43 |
| KRH57434 | Soybean | nucleus | 43.12 | 42.13 |
| AT5G47440.1 | Thale cress | nucleus | 43.12 | 40.89 |
| CDX77767 | Canola | nucleus | 42.6 | 40.39 |
| Bra024944.1-P | Field mustard | cytosol | 42.08 | 40.0 |
| CDY59298 | Canola | nucleus | 42.08 | 39.9 |
| AT4G16670.1 | Thale cress | cytosol | 41.56 | 37.3 |
| Bra038497.1-P | Field mustard | nucleus | 41.3 | 36.89 |
| CDY40515 | Canola | cytosol | 41.56 | 36.45 |
| CDY32269 | Canola | cytosol | 35.58 | 36.24 |
| TraesCS5A01G377600.1 | Wheat | nucleus | 38.7 | 32.46 |
| TraesCS5A01G056700.2 | Wheat | nucleus | 39.22 | 32.06 |
| TraesCS3A01G155500.1 | Wheat | cytosol | 34.81 | 31.02 |
| TraesCS2A01G355900.2 | Wheat | cytosol | 26.23 | 23.99 |
Protein Annotations
Description
No Description!
Coordinates
chr6A:+:464619794..464621135
Molecular Weight (calculated)
41085.0 Da
IEP (calculated)
10.345
GRAVY (calculated)
-0.308
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGYLLGRTK RRDHLLLMDS AGAVQSPQTP VEPMEFLSRS WSVSASDLSK VLAVGGGRRS SNFVVDRLSG MLMPETLALA AASGAGSPKK RTCRSRSAIS
101: AHHHTIGRWF HHKDGGSRVD KARAERARVH AAVSVASVAA AVAALAAGAA NPEDGEDAKM DAALASATQL LASHCIEFAE LAGADHDQVA SAVEGAVDVR
201: SPGDLMTLTA AAATALRGAT ALRQREQREA RSKAAVAPSE KAGSCGADIW CKEGTLLKRS RKGALRWKRV SVYINKRSQV IVKLKSKHIG GAFSKKKRSV
301: VYGVHDDMPA WPPGHEPCGM PDSATAAPEK RHFGLRTVQG LVEFECESRM HKQEWVESVK NLLRQAAGGT AQLEQSFESL RLSAS
101: AHHHTIGRWF HHKDGGSRVD KARAERARVH AAVSVASVAA AVAALAAGAA NPEDGEDAKM DAALASATQL LASHCIEFAE LAGADHDQVA SAVEGAVDVR
201: SPGDLMTLTA AAATALRGAT ALRQREQREA RSKAAVAPSE KAGSCGADIW CKEGTLLKRS RKGALRWKRV SVYINKRSQV IVKLKSKHIG GAFSKKKRSV
301: VYGVHDDMPA WPPGHEPCGM PDSATAAPEK RHFGLRTVQG LVEFECESRM HKQEWVESVK NLLRQAAGGT AQLEQSFESL RLSAS
001: MESGFYSDWK DTSSSSFFGS ENMEEELEDG VLRAEELFSS IPQPQTPKEP MEFLSRSWSL STSEISKALA LKHRQQQDQF CVGQNSPPVL FPDAAADPLV
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT
Arabidopsis Description
At4g17350 [Source:UniProtKB/TrEMBL;Acc:Q5U1F1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.