Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- endoplasmic reticulum 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28119 | Soybean | nucleus | 94.37 | 94.37 |
| KRH04152 | Soybean | nucleus | 69.57 | 69.21 |
| KRH57434 | Soybean | nucleus | 67.77 | 67.26 |
| PGSC0003DMT400012161 | Potato | nucleus | 53.71 | 53.85 |
| Solyc08g078500.2.1 | Tomato | cytosol | 53.45 | 53.59 |
| Bra026246.1-P | Field mustard | nucleus | 54.22 | 52.61 |
| CDY09634 | Canola | nucleus | 54.99 | 52.57 |
| CDY65120 | Canola | cytosol | 53.96 | 52.36 |
| AT4G17350.1 | Thale cress | cytosol | 54.22 | 52.35 |
| CDY64500 | Canola | cytosol | 53.45 | 51.86 |
| CDY59298 | Canola | nucleus | 50.9 | 49.01 |
| GSMUA_Achr8P11040_001 | Banana | cytosol | 41.94 | 48.96 |
| AT5G47440.1 | Thale cress | nucleus | 50.64 | 48.77 |
| Bra024944.1-P | Field mustard | cytosol | 50.38 | 48.64 |
| CDX77767 | Canola | nucleus | 49.1 | 47.29 |
| GSMUA_Achr11P... | Banana | nucleus | 45.27 | 44.7 |
| TraesCS6B01G275000.1 | Wheat | cytosol | 43.22 | 43.78 |
| TraesCS6A01G250400.1 | Wheat | cytosol | 42.46 | 43.12 |
| HORVU0Hr1G032140.1 | Barley | cytosol | 42.71 | 42.82 |
| HORVU0Hr1G027000.1 | Barley | cytosol | 42.71 | 42.82 |
| TraesCS6D01G232200.2 | Wheat | cytosol | 42.46 | 42.56 |
| HORVU6Hr1G062990.1 | Barley | cytosol | 42.71 | 41.85 |
| Os10t0560000-01 | Rice | cytosol | 39.9 | 41.16 |
| Zm00001d051361_P001 | Maize | plastid | 43.99 | 40.09 |
| TraesCS1B01G234200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 38.87 | 39.58 |
| KXG31087 | Sorghum | nucleus | 43.22 | 39.58 |
| HORVU1Hr1G056150.4 | Barley | cytosol, nucleus | 38.62 | 39.43 |
| TraesCS1A01G220700.1 | Wheat | cytosol | 38.62 | 39.32 |
| TraesCS4D01G363600.1 | Wheat | mitochondrion, nucleus | 39.39 | 38.89 |
| Zm00001d000175_P001 | Maize | plastid | 39.39 | 38.79 |
| TraesCS5A01G540500.1 | Wheat | cytosol | 36.57 | 38.54 |
| TraesCS3A01G147100.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 37.6 | 38.18 |
| TraesCS5A01G540300.1 | Wheat | extracellular | 39.64 | 37.99 |
| EER94492 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 39.9 | 37.96 |
| TraesCS4B01G373700.1 | Wheat | nucleus | 38.62 | 37.56 |
| Zm00001d029886_P001 | Maize | vacuole | 37.6 | 37.12 |
| TraesCS1D01G222200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 38.87 | 36.63 |
| KRH62055 | Soybean | cytosol, extracellular, nucleus, plastid | 35.04 | 33.17 |
| KRH52723 | Soybean | cytosol, extracellular, nucleus, plastid | 33.76 | 31.21 |
| KRG91356 | Soybean | cytosol | 36.57 | 30.04 |
| KRH67258 | Soybean | nucleus | 29.16 | 29.84 |
| KRH35470 | Soybean | nucleus | 35.81 | 29.41 |
| KRH31661 | Soybean | nucleus | 36.06 | 29.19 |
| KRH69115 | Soybean | nucleus | 35.81 | 28.81 |
| KRH32056 | Soybean | nucleus | 34.78 | 28.27 |
| KRG95576 | Soybean | nucleus | 34.78 | 28.04 |
| KRH71381 | Soybean | nucleus | 34.02 | 27.65 |
| KRH02952 | Soybean | cytosol | 21.74 | 22.14 |
| KRH18946 | Soybean | nucleus | 21.74 | 21.96 |
Protein Annotations
| EMBL:ACUP02000669 | EnsemblPlants:KRH77342 | EnsemblPlantsGene:GLYMA_01G207900 | InterPro:DUF828 | InterPro:PH_pln | PANTHER:PTHR31351 |
| PANTHER:PTHR31351:SF2 | PFAM:PF05703 | PFAM:PF08458 | ProteinID:KRH77342 | ProteinID:KRH77342.1 | SEG:seg |
| UniParc:UPI0006EDC9AC | UniProt:A0A0R0LEJ2 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:53980376..53983291
Molecular Weight (calculated)
43114.7 Da
IEP (calculated)
9.551
GRAVY (calculated)
-0.358
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGFFTPWK NEPWQELASE DVKESEQLIS LPPLAEPPTP REPMEFLSRS WSLSASEISK ALSEKQKQTF LDNKAPDTLP EPISAPQLAG GKMIVSGNCR
101: RMGAIGKWLH QKQYGITNVS VKKKDRARVE NARVHSALSI AGLASAVAAV AATEDPRGGS RSKLDVALAS ATQLLASYCV EIAEIVGADR QRVASTVRSA
201: VDIQTPGDLM TLTAAAATGD AALTARMPKE AKKNASISPY DKVIAETQWL RAFDGQMLER YPPCLGDLLQ LTEKGALRWR HVHVYIKKCQ VKVKIKSKHV
301: GGAFSKKNKF VTGVVYGVCD KDNAWPYRKE REASEELYFG LKTAQGLLEF KCQNKLHKQK WVDGIEFLLR RVNSVEATEH SLEFLSISTS T
101: RMGAIGKWLH QKQYGITNVS VKKKDRARVE NARVHSALSI AGLASAVAAV AATEDPRGGS RSKLDVALAS ATQLLASYCV EIAEIVGADR QRVASTVRSA
201: VDIQTPGDLM TLTAAAATGD AALTARMPKE AKKNASISPY DKVIAETQWL RAFDGQMLER YPPCLGDLLQ LTEKGALRWR HVHVYIKKCQ VKVKIKSKHV
301: GGAFSKKNKF VTGVVYGVCD KDNAWPYRKE REASEELYFG LKTAQGLLEF KCQNKLHKQK WVDGIEFLLR RVNSVEATEH SLEFLSISTS T
001: MESGFYSDWK DTSSSSFFGS ENMEEELEDG VLRAEELFSS IPQPQTPKEP MEFLSRSWSL STSEISKALA LKHRQQQDQF CVGQNSPPVL FPDAAADPLV
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT
Arabidopsis Description
At4g17350 [Source:UniProtKB/TrEMBL;Acc:Q5U1F1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.