Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G032140.1 | Barley | cytosol | 100.0 | 100.0 |
| HORVU6Hr1G062990.1 | Barley | cytosol | 98.97 | 96.74 |
| TraesCS6A01G250400.1 | Wheat | cytosol | 94.36 | 95.58 |
| TraesCS6B01G275000.1 | Wheat | cytosol | 93.59 | 94.56 |
| TraesCS6D01G232200.2 | Wheat | cytosol | 94.36 | 94.36 |
| KXG31087 | Sorghum | nucleus | 74.36 | 67.92 |
| Zm00001d051361_P001 | Maize | plastid | 73.33 | 66.67 |
| HORVU1Hr1G056150.4 | Barley | cytosol, nucleus | 52.05 | 53.0 |
| KRH28119 | Soybean | nucleus | 44.1 | 43.99 |
| CDY64500 | Canola | cytosol | 45.38 | 43.92 |
| CDY65120 | Canola | cytosol | 44.87 | 43.42 |
| KRH04152 | Soybean | nucleus | 43.59 | 43.26 |
| Bra026246.1-P | Field mustard | nucleus | 44.62 | 43.18 |
| Solyc08g078500.2.1 | Tomato | cytosol | 43.08 | 43.08 |
| PGSC0003DMT400012161 | Potato | nucleus | 43.08 | 43.08 |
| AT4G17350.1 | Thale cress | cytosol | 44.62 | 42.96 |
| CDY09634 | Canola | nucleus | 44.87 | 42.79 |
| KRH77342 | Soybean | cytosol, endoplasmic reticulum, nucleus | 42.82 | 42.71 |
| KRH57434 | Soybean | nucleus | 42.82 | 42.39 |
| AT5G47440.1 | Thale cress | nucleus | 42.31 | 40.64 |
| CDX77767 | Canola | nucleus | 41.79 | 40.15 |
| Bra024944.1-P | Field mustard | cytosol | 41.28 | 39.75 |
| CDY59298 | Canola | nucleus | 41.28 | 39.66 |
| Bra038497.1-P | Field mustard | nucleus | 40.26 | 36.43 |
| AT4G16670.1 | Thale cress | cytosol | 40.0 | 36.36 |
| CDY40515 | Canola | cytosol | 40.51 | 35.99 |
| CDY32269 | Canola | cytosol | 34.87 | 35.98 |
| HORVU5Hr1G093460.2 | Barley | nucleus | 38.21 | 32.11 |
| HORVU3Hr1G031590.6 | Barley | cytosol, nucleus, plastid | 32.56 | 18.65 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G027000.1 | EnsemblPlantsGene:HORVU0Hr1G027000 | InterPro:DUF828 | InterPro:IPR001849 | InterPro:PH_domain | InterPro:PH_pln |
| PANTHER:PTHR31351 | PANTHER:PTHR31351:SF2 | PFAM:PF05703 | PFAM:PF08458 | PFscan:PS50003 | SEG:seg |
| SMART:SM00233 | UniParc:UPI000B46627B | UniProt:A0A287EAP7 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchrUn:-:142998760..143000107
Molecular Weight (calculated)
41731.8 Da
IEP (calculated)
10.495
GRAVY (calculated)
-0.319
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGYLLGRTK RRDHLLLMDS AGGAVQPPQT PVEPMEFLSR SWSVSASDLS KVLAVGGGRR SSNFVVDRLS GMLMPETLAL AAASGTNSPK KRVRLQPCRS
101: RSAISGHHHA IGRWFHHKDG GSRVDKARAE RARVHAAVSV ASVAAAVAAL ASGAANPEDA EDAKMDAALA SATQLLASHC IEFAELAGAD HDQVASAVEG
201: AVDVRSPGDL MTLTAAAATA LRGATALRQR EQREARSKAA VAPFEKAGSC GTDIWCKEGT LLKRSRKGAL RWKRVSVYIN KRSQVIVKLK SKHIGGAFSK
301: KKRSVVYGVH DDMPAWPPGH ESCGMPDSSA AAPEKRHFGL RTAQGLVEFE CESRVHKQEW VESVKNLLRQ AAGGTAQLEH SFQSLRLSAS
101: RSAISGHHHA IGRWFHHKDG GSRVDKARAE RARVHAAVSV ASVAAAVAAL ASGAANPEDA EDAKMDAALA SATQLLASHC IEFAELAGAD HDQVASAVEG
201: AVDVRSPGDL MTLTAAAATA LRGATALRQR EQREARSKAA VAPFEKAGSC GTDIWCKEGT LLKRSRKGAL RWKRVSVYIN KRSQVIVKLK SKHIGGAFSK
301: KKRSVVYGVH DDMPAWPPGH ESCGMPDSSA AAPEKRHFGL RTAQGLVEFE CESRVHKQEW VESVKNLLRQ AAGGTAQLEH SFQSLRLSAS
001: MEKPVFAPWR SDQVFRPPET PLEPMEFLSR SWSVSAHEVS KALTPSQQLL SKASIENTTV ILEEPIAAGE TETEDNSFVS GNPFSFACSE TSQMVMDRIL
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KNVVIDVIKN VQAWPGRHLL EGGEDLRYFG LKTVPRGIVE FQCKSQREYE MWTQGVSRLI AVAAERNNRY RI
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KNVVIDVIKN VQAWPGRHLL EGGEDLRYFG LKTVPRGIVE FQCKSQREYE MWTQGVSRLI AVAAERNNRY RI
Arabidopsis Description
Auxin canalization protein (DUF828) [Source:UniProtKB/TrEMBL;Acc:Q9LUI0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.