CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57434	Soybean	nucleus	95.42	95.18
KRH28119	Soybean	nucleus	71.76	72.12
KRH77342	Soybean	cytosol, endoplasmic reticulum, nucleus	69.21	69.57
PGSC0003DMT400012161	Potato	nucleus	56.49	56.92
Solyc08g078500.2.1	Tomato	cytosol	56.23	56.67
CDY64500	Canola	cytosol	57.25	55.83
AT4G17350.1	Thale cress	cytosol	57.25	55.56
Bra026246.1-P	Field mustard	nucleus	56.49	55.09
CDY09634	Canola	nucleus	57.25	55.01
CDY65120	Canola	cytosol	55.98	54.59
AT5G47440.1	Thale cress	nucleus	53.18	51.48
Bra024944.1-P	Field mustard	cytosol	51.91	50.37
CDY59298	Canola	nucleus	51.4	49.75
GSMUA_Achr8P11040_001	Banana	cytosol	42.24	49.55
CDX77767	Canola	nucleus	50.89	49.26
GSMUA_Achr11P...	Banana	nucleus	46.56	46.21
TraesCS6B01G275000.1	Wheat	cytosol	43.26	44.04
TraesCS6A01G250400.1	Wheat	cytosol	43.0	43.9
HORVU0Hr1G027000.1	Barley	cytosol	43.26	43.59
HORVU0Hr1G032140.1	Barley	cytosol	43.26	43.59
TraesCS6D01G232200.2	Wheat	cytosol	42.75	43.08
HORVU6Hr1G062990.1	Barley	cytosol	43.26	42.61
Os10t0560000-01	Rice	cytosol	40.97	42.48
Zm00001d000175_P001	Maize	plastid	41.48	41.06
TraesCS1B01G234200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	39.95	40.89
TraesCS1A01G220700.1	Wheat	cytosol	39.69	40.62
TraesCS5A01G540500.1	Wheat	cytosol	38.17	40.43
EER94492	Sorghum	cytosol, endoplasmic reticulum, nucleus	42.24	40.39
HORVU1Hr1G056150.4	Barley	cytosol, nucleus	39.19	40.21
Zm00001d029886_P001	Maize	vacuole	40.46	40.15
TraesCS4D01G363600.1	Wheat	mitochondrion, nucleus	39.95	39.65
TraesCS3A01G147100.2	Wheat	cytosol, endoplasmic reticulum, nucleus	38.68	39.48
Zm00001d051361_P001	Maize	plastid	42.75	39.16
KXG31087	Sorghum	nucleus	42.24	38.88
TraesCS5A01G540300.1	Wheat	extracellular	40.2	38.73
TraesCS4B01G373700.1	Wheat	nucleus	39.19	38.31
TraesCS1D01G222200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	39.69	37.59
KRH62055	Soybean	cytosol, extracellular, nucleus, plastid	36.39	34.62
KRH52723	Soybean	cytosol, extracellular, nucleus, plastid	35.37	32.86
KRH67258	Soybean	nucleus	30.03	30.89
KRG91356	Soybean	cytosol	35.88	29.62
KRH35470	Soybean	nucleus	35.11	28.99
KRG95576	Soybean	nucleus	35.62	28.87
KRH32056	Soybean	nucleus	34.86	28.48
KRH69115	Soybean	nucleus	34.86	28.19
KRH31661	Soybean	nucleus	34.61	28.16
KRH71381	Soybean	nucleus	34.1	27.86
KRH02952	Soybean	cytosol	22.65	23.18
KRH18946	Soybean	nucleus	22.65	23.0

Protein Annotations

EMBL:ACUP02010384	EnsemblPlants:KRH04152	EnsemblPlantsGene:GLYMA_17G142900	EntrezGene:100800033	InterPro:DUF828	InterPro:PH_pln
PANTHER:PTHR31351	PANTHER:PTHR31351:SF2	PFAM:PF05703	PFAM:PF08458	ProteinID:KRH04152	ProteinID:KRH04152.1
SEG:seg	UniParc:UPI000233F22F	UniProt:I1MV23	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr17:-:11617843..11621949

Molecular Weight (calculated)

43364.0 Da

IEP (calculated)

9.731

GRAVY (calculated)

-0.402

Length

393 amino acids

Sequence
(BLAST)

001: MDGGYFPPRK IGSWHGLELE DVQENDELKL VTSLSAIPQP PTPHEPMEFL SRSWSLSAAE ISKALLEKQK HTFHDKNQAT FPEAILAPQL VTSKIIPSPY
101: SRKMGTIGKW FHQRHHGNTN ITVKKKDRAR LENARVHSAV SIAGLASALA AVAAAENSCG SQTKLKLALA SATQLLASHC IEMAELAGAD HDHVASTIKS
201: AVDIQTPGDL MTLTAAAATA LRGEAALRAR LPNEAKRNAS ISPNDRVQLP QSHWFSAFEG QSCEHHPPCV GDLWQLTRKG VLRWKHVSVY INKKCQVKIK
301: IKSKHVGGAF SKKNKCVVYG ICDKDGAWPY RKERKTSEEY FGLKTAQGLL EFKCDSKLHK QKWVDGIGCL LRRVNSIEAT ERSLDLLSIN SDT

Best Arabidopsis Sequence Match ( AT4G17350.1 )
(BLAST)

001: MESGFYSDWK DTSSSSFFGS ENMEEELEDG VLRAEELFSS IPQPQTPKEP MEFLSRSWSL STSEISKALA LKHRQQQDQF CVGQNSPPVL FPDAAADPLV
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT

Arabidopsis Description

At4g17350 [Source:UniProtKB/TrEMBL;Acc:Q5U1F1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.