Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G234200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 75.99 | 75.0 |
| TraesCS1A01G220700.1 | Wheat | cytosol | 75.99 | 75.0 |
| HORVU1Hr1G056150.4 | Barley | cytosol, nucleus | 75.73 | 74.93 |
| TraesCS3A01G147100.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 75.2 | 74.03 |
| EER94492 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 77.31 | 71.29 |
| Zm00001d000175_P001 | Maize | plastid | 74.41 | 71.03 |
| TraesCS1D01G222200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 76.25 | 69.64 |
| Zm00001d029886_P001 | Maize | vacuole | 72.56 | 69.44 |
| GSMUA_Achr8P11040_001 | Banana | cytosol | 56.73 | 64.18 |
| GSMUA_Achr11P... | Banana | nucleus | 61.74 | 59.09 |
| CDY65120 | Canola | cytosol | 46.97 | 44.17 |
| Bra026246.1-P | Field mustard | nucleus | 46.7 | 43.92 |
| CDY09634 | Canola | nucleus | 47.23 | 43.77 |
| AT4G17350.1 | Thale cress | cytosol | 46.7 | 43.7 |
| CDY64500 | Canola | cytosol | 46.17 | 43.42 |
| KRH28119 | Soybean | nucleus | 42.48 | 41.18 |
| PGSC0003DMT400012161 | Potato | nucleus | 42.22 | 41.03 |
| KRH04152 | Soybean | nucleus | 42.48 | 40.97 |
| Solyc08g078500.2.1 | Tomato | cytosol | 41.69 | 40.51 |
| KRH57434 | Soybean | nucleus | 41.69 | 40.1 |
| AT5G47440.1 | Thale cress | nucleus | 42.74 | 39.9 |
| KRH77342 | Soybean | cytosol, endoplasmic reticulum, nucleus | 41.16 | 39.9 |
| Bra024944.1-P | Field mustard | cytosol | 40.9 | 38.27 |
| CDX77767 | Canola | nucleus | 40.63 | 37.93 |
| CDY59298 | Canola | nucleus | 40.37 | 37.68 |
| AT4G16670.1 | Thale cress | cytosol | 40.63 | 35.9 |
| CDY40515 | Canola | cytosol | 40.63 | 35.08 |
| Bra038497.1-P | Field mustard | nucleus | 39.58 | 34.8 |
| CDY32269 | Canola | cytosol | 34.04 | 34.13 |
| Os04t0498000-01 | Rice | cytosol | 9.23 | 30.7 |
| Os12t0604200-00 | Rice | nucleus | 29.02 | 29.65 |
| Os01t0231600-00 | Rice | cytosol | 6.86 | 28.57 |
| Os03t0635800-01 | Rice | nucleus | 27.7 | 27.78 |
Protein Annotations
| Gene3D:2.30.29.30 | MapMan:35.1 | EntrezGene:4349374 | ProteinID:AAL79791.1 | ProteinID:AAP55003.1 | EMBL:AK066334 |
| ProteinID:BAF27213.1 | ProteinID:BAT12043.1 | InterPro:DUF828 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR011993 | EnsemblPlantsGene:Os10g0560000 | EnsemblPlants:Os10t0560000-01 | PFAM:PF05703 | PFAM:PF08458 | InterPro:PH-like_dom_sf |
| InterPro:PH_pln | PANTHER:PTHR31351 | PANTHER:PTHR31351:SF5 | UniProt:Q7XC71 | SUPFAM:SSF50729 | UniParc:UPI00000A0429 |
| RefSeq:XP_015614436.1 | SEG:seg | : | : | : | : |
Description
Protein of unknown function DUF828, plant family protein. (Os10t0560000-01);Similar to predicted protein. (Os10t0560000-02)
Coordinates
chr10:+:22055014..22056950
Molecular Weight (calculated)
41618.9 Da
IEP (calculated)
9.944
GRAVY (calculated)
-0.319
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMERAWKPR EIADTFGIEM DEEEAAAAAI PPPQTPLEPM EYLSRSWSVS ASEISKILFN GSKKSFAAKR LPEMTIPENS VVAASIVPSH LQHIDTRRNS
101: ISSHHLPIGR WFQHKEASRV KQSSKEKLRA EKAHVHAMVS VARVAAAVAA VTAATTSSDI QTSKMAAAMV SATELLASHC VEIAQHAGAR HEQVACAIQS
201: AVGVRSSGDL MTLTAAAATA LRGAATMKQR VQREMRSNAS VLPYEKGHSW SPDIWCKEGE LLKRTRKGDL HKTRVSIYIN KRSQVILKLK SKHIGGALSK
301: KNKSVVFGVY NELPTWVEAG KHFTEERCCF GLSTAQGLVE FECENSTSKQ RWVDDVKNLL RQVAAEEQVE NKLGSVKLS
101: ISSHHLPIGR WFQHKEASRV KQSSKEKLRA EKAHVHAMVS VARVAAAVAA VTAATTSSDI QTSKMAAAMV SATELLASHC VEIAQHAGAR HEQVACAIQS
201: AVGVRSSGDL MTLTAAAATA LRGAATMKQR VQREMRSNAS VLPYEKGHSW SPDIWCKEGE LLKRTRKGDL HKTRVSIYIN KRSQVILKLK SKHIGGALSK
301: KNKSVVFGVY NELPTWVEAG KHFTEERCCF GLSTAQGLVE FECENSTSKQ RWVDDVKNLL RQVAAEEQVE NKLGSVKLS
001: MESGFYSDWK DTSSSSFFGS ENMEEELEDG VLRAEELFSS IPQPQTPKEP MEFLSRSWSL STSEISKALA LKHRQQQDQF CVGQNSPPVL FPDAAADPLV
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT
Arabidopsis Description
At4g17350 [Source:UniProtKB/TrEMBL;Acc:Q5U1F1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.