Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038497.1-P | Field mustard | nucleus | 91.27 | 80.05 |
| CDY40515 | Canola | cytosol | 91.8 | 79.04 |
| AT4G16670.1 | Thale cress | cytosol | 76.19 | 67.13 |
| CDY64500 | Canola | cytosol | 42.86 | 40.2 |
| CDY65120 | Canola | cytosol | 41.8 | 39.21 |
| CDY09634 | Canola | nucleus | 41.01 | 37.9 |
| GSMUA_Achr8P11040_001 | Banana | cytosol | 33.33 | 37.61 |
| TraesCS6A01G250400.1 | Wheat | cytosol | 36.24 | 35.58 |
| TraesCS6B01G275000.1 | Wheat | cytosol | 36.24 | 35.49 |
| TraesCS6D01G232200.2 | Wheat | cytosol | 36.51 | 35.38 |
| GSMUA_Achr11P... | Banana | nucleus | 36.77 | 35.1 |
| HORVU0Hr1G027000.1 | Barley | cytosol | 35.98 | 34.87 |
| HORVU0Hr1G032140.1 | Barley | cytosol | 35.98 | 34.87 |
| TraesCS1A01G220700.1 | Wheat | cytosol | 34.66 | 34.11 |
| HORVU6Hr1G062990.1 | Barley | cytosol | 35.98 | 34.09 |
| Os10t0560000-01 | Rice | cytosol | 34.13 | 34.04 |
| HORVU1Hr1G056150.4 | Barley | cytosol, nucleus | 34.39 | 33.94 |
| TraesCS1B01G234200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 34.39 | 33.85 |
| Zm00001d000175_P001 | Maize | plastid | 34.92 | 33.25 |
| KXG31087 | Sorghum | nucleus | 37.3 | 33.02 |
| TraesCS3A01G147100.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 33.6 | 32.99 |
| CDY59298 | Canola | nucleus | 34.92 | 32.51 |
| CDX77767 | Canola | nucleus | 34.66 | 32.27 |
| Zm00001d051361_P001 | Maize | plastid | 36.51 | 32.17 |
| EER94492 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 34.66 | 31.87 |
| Zm00001d029886_P001 | Maize | vacuole | 33.33 | 31.82 |
| TraesCS5A01G540500.1 | Wheat | cytosol | 31.22 | 31.81 |
| TraesCS1D01G222200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 34.66 | 31.57 |
| TraesCS4D01G363600.1 | Wheat | mitochondrion, nucleus | 33.07 | 31.57 |
| TraesCS5A01G540300.1 | Wheat | extracellular | 33.33 | 30.88 |
| TraesCS4B01G373700.1 | Wheat | nucleus | 32.28 | 30.35 |
| CDY16256 | Canola | cytosol | 28.04 | 26.5 |
| CDY14898 | Canola | cytosol | 29.63 | 24.83 |
| CDY22328 | Canola | plastid | 29.63 | 24.83 |
| CDX94730 | Canola | cytosol | 29.37 | 24.72 |
| CDY29764 | Canola | nucleus | 28.57 | 24.38 |
| CDY50683 | Canola | cytosol, endoplasmic reticulum, nucleus | 29.63 | 24.09 |
| CDX93914 | Canola | nucleus | 30.42 | 23.42 |
| CDY53717 | Canola | nucleus | 30.42 | 23.42 |
| CDX68890 | Canola | cytosol | 25.66 | 22.72 |
| CDX75286 | Canola | cytosol | 25.66 | 22.72 |
| CDX96925 | Canola | plastid | 29.37 | 22.65 |
| CDY46598 | Canola | mitochondrion | 28.31 | 22.15 |
| CDY36868 | Canola | nucleus | 12.43 | 20.43 |
| CDY36869 | Canola | nucleus, plastid | 8.73 | 18.97 |
| CDY51283 | Canola | cytosol | 19.05 | 17.56 |
| CDY02766 | Canola | cytosol | 19.05 | 17.39 |
| CDY50798 | Canola | cytosol, endoplasmic reticulum, nucleus | 18.78 | 17.27 |
Protein Annotations
| EnsemblPlants:CDY32269 | EnsemblPlantsGene:GSBRNA2T00051719001 | InterPro:DUF828 | InterPro:PH_pln | PANTHER:PTHR31351 | PANTHER:PTHR31351:SF2 |
| PFAM:PF05703 | PFAM:PF08458 | ProteinID:CDY32269 | ProteinID:CDY32269.1 | SEG:seg | UniParc:UPI0004EDF167 |
| UniProt:A0A078H4E5 | MapMan:35.2 | : | : | : | : |
Description
BnaA01g17150DBnaA01g17150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4E5]
Coordinates
chrLK032290:-:387050..390140
Molecular Weight (calculated)
40988.4 Da
IEP (calculated)
6.441
GRAVY (calculated)
-0.382
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQERTLNLF PYGLQEVAEV EEIEEDNDNE SMTLSSVPEN ETSECSSSPE TYPPIPPRPK TPREPMEFLC RSWSSSTSEI SLALSSQKSN KQLNKTHTLS
101: ELAGVTSPAP APLPPPLRTE KPASVVHARR TSAIGKWFHH RDFVGGKVSS ISKRDKSRYE NAHLHTAVSI ASLATAIAAV TASGNQDGAL MESKMISALA
201: SASELLASHC VELAELSGAG HDRVVSAVRS AVDVRGPGDL LTLTAAAATA LRGEAALRTR LPKEAKNNAA ISPCERALPE THDCSSELDS SSTTTEEQTS
301: AQGVDESDLT CNGELMQCTR NGVLRWKHMK VYINKKSQVV VEIKSKHVRG GTLLWIAPVT PIMRITETET WTRLVLRL
101: ELAGVTSPAP APLPPPLRTE KPASVVHARR TSAIGKWFHH RDFVGGKVSS ISKRDKSRYE NAHLHTAVSI ASLATAIAAV TASGNQDGAL MESKMISALA
201: SASELLASHC VELAELSGAG HDRVVSAVRS AVDVRGPGDL LTLTAAAATA LRGEAALRTR LPKEAKNNAA ISPCERALPE THDCSSELDS SSTTTEEQTS
301: AQGVDESDLT CNGELMQCTR NGVLRWKHMK VYINKKSQVV VEIKSKHVRG GTLLWIAPVT PIMRITETET WTRLVLRL
001: MEYDRTLNLI PYGLQGVREE EEIEEDDEES MTLSSVPENE TSECSSPPAT YPPIPPRPKT PREPMEFLCR SWSLSTSEIS LALSSQKSDK QLNKNPNISQ
101: LADVTSLAPV APPPPLQTGK LASAVHARRT GTIGKWFHHR EFVGGKVSAV KKRDRVRVEK AHLHSAVSIA SLATAIAAVT ASGNQDGFAG SKMSSALASA
201: SELLASHCLE LAELAGADHD RVVSAVRSAV DVRGPGDLLT LTAAAATALR GEAALRVRLP KEAKNSAAIS PCERVLPETH SCSSELDRTS TTDELISAKG
301: VEESTGELMQ CTRNGVLRWK HVKVYINKKS QVIVEIKSKH VVGAFSMKSK G
101: LADVTSLAPV APPPPLQTGK LASAVHARRT GTIGKWFHHR EFVGGKVSAV KKRDRVRVEK AHLHSAVSIA SLATAIAAVT ASGNQDGFAG SKMSSALASA
201: SELLASHCLE LAELAGADHD RVVSAVRSAV DVRGPGDLLT LTAAAATALR GEAALRVRLP KEAKNSAAIS PCERVLPETH SCSSELDRTS TTDELISAKG
301: VEESTGELMQ CTRNGVLRWK HVKVYINKKS QVIVEIKSKH VVGAFSMKSK G
Arabidopsis Description
At4g16670 [Source:UniProtKB/TrEMBL;Acc:Q5HZ31]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.