Factsheet for TraesCS5A01G540500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G363600.1	Wheat	mitochondrion, nucleus	87.87	82.32
TraesCS5A01G540300.1	Wheat	extracellular	88.95	80.88
TraesCS4B01G373700.1	Wheat	nucleus	87.6	80.85
TraesCS1A01G220700.1	Wheat	cytosol	57.95	55.99
GSMUA_Achr8P11040_001	Banana	cytosol	49.6	54.93
TraesCS3A01G147100.2	Wheat	cytosol, endoplasmic reticulum, nucleus	56.6	54.55
TraesCS6A01G250400.1	Wheat	cytosol	50.67	48.83
GSMUA_Achr11P...	Banana	nucleus	50.13	46.97
KRH04152	Soybean	nucleus	40.43	38.17
KRH28119	Soybean	nucleus	40.16	38.11
CDY09634	Canola	nucleus	41.78	37.9
KRH57434	Soybean	nucleus	40.16	37.82
CDY65120	Canola	cytosol	40.97	37.72
PGSC0003DMT400012161	Potato	nucleus	39.62	37.69
CDY64500	Canola	cytosol	40.7	37.47
Bra026246.1-P	Field mustard	nucleus	40.7	37.47
AT4G17350.1	Thale cress	cytosol	40.7	37.28
Solyc08g078500.2.1	Tomato	cytosol	38.81	36.92
KRH77342	Soybean	cytosol, endoplasmic reticulum, nucleus	38.54	36.57
AT5G47440.1	Thale cress	nucleus	38.54	35.22
Bra024944.1-P	Field mustard	cytosol	37.47	34.32
CDY59298	Canola	nucleus	37.2	33.99
CDX77767	Canola	nucleus	36.93	33.74
AT4G16670.1	Thale cress	cytosol	37.74	32.63
CDY40515	Canola	cytosol	38.01	32.12
CDY32269	Canola	cytosol	31.81	31.22
Bra038497.1-P	Field mustard	nucleus	36.12	31.09
TraesCS3A01G155500.1	Wheat	cytosol	33.15	28.47
TraesCS5A01G377600.1	Wheat	nucleus	33.96	27.45
TraesCS5A01G056700.2	Wheat	nucleus	34.5	27.18
TraesCS2A01G355900.2	Wheat	cytosol	23.72	20.9

Protein Annotations

EnsemblPlants:TraesCS5A01G540500.1	EnsemblPlantsGene:TraesCS5A01G540500	InterPro:DUF828	InterPro:PH_pln	PANTHER:PTHR31351	PANTHER:PTHR31351:SF5
PFAM:PF05703	PFAM:PF08458	SEG:seg	SUPFAM:SSF50729	MapMan:35.2	:

Description

No Description!

Coordinates

chr5A:+:697882916..697884759

Molecular Weight (calculated)

39965.7 Da

IEP (calculated)

10.069

GRAVY (calculated)

-0.338

Length

371 amino acids

Sequence
(BLAST)

001: MPPALLLARH GMDDQMPASS AAVPPPQTPM EPMEYLSRSW SVSADEISKA LLLKGSSKRS FFAPVDSLLP PHTTALPETE TTSYELLAAP AASGQQLQHQ
101: HLDATRSSIS CRRHSNSVTR WYFQHKEAAG HRGRDKARAD RAQAHAMVSM AQVSAAVAAV TAATSCDSQD SKIAAAMESA TKLLASHCAE AAQLAGAGHE
201: QVSSTVRSAV GVTGPGDLMT LTVAAATALR GAAALKKRIQ REARSNSSVI PYDKAPSWSP DIWCKEGKLL KRTRKGDLHK RRVSVYINKR SQVILKLKSK
301: HIGGALSKNN KSLPETCCFG LSTAQGLIEF KCESSTSKQS WVHGVQNLLQ QVDVADQVGH RLETLKLNWC S

Best Arabidopsis Sequence Match ( AT4G17350.1 )
(BLAST)

001: MESGFYSDWK DTSSSSFFGS ENMEEELEDG VLRAEELFSS IPQPQTPKEP MEFLSRSWSL STSEISKALA LKHRQQQDQF CVGQNSPPVL FPDAAADPLV
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT

Arabidopsis Description

At4g17350 [Source:UniProtKB/TrEMBL;Acc:Q5U1F1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.