Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g078500.2.1 | Tomato | cytosol | 97.18 | 97.18 |
| KRH04152 | Soybean | nucleus | 56.92 | 56.49 |
| KRH57434 | Soybean | nucleus | 55.64 | 55.08 |
| KRH28119 | Soybean | nucleus | 55.13 | 54.99 |
| KRH77342 | Soybean | cytosol, endoplasmic reticulum, nucleus | 53.85 | 53.71 |
| AT4G17350.1 | Thale cress | cytosol | 54.36 | 52.35 |
| CDY64500 | Canola | cytosol | 53.33 | 51.61 |
| CDY09634 | Canola | nucleus | 54.1 | 51.59 |
| Bra026246.1-P | Field mustard | nucleus | 53.08 | 51.36 |
| CDY65120 | Canola | cytosol | 52.82 | 51.12 |
| AT5G47440.1 | Thale cress | nucleus | 52.05 | 50.0 |
| CDY59298 | Canola | nucleus | 50.77 | 48.77 |
| Bra024944.1-P | Field mustard | cytosol | 50.51 | 48.64 |
| GSMUA_Achr8P11040_001 | Banana | cytosol | 41.54 | 48.36 |
| CDX77767 | Canola | nucleus | 49.74 | 47.78 |
| GSMUA_Achr11P... | Banana | nucleus | 45.38 | 44.7 |
| TraesCS6A01G250400.1 | Wheat | cytosol | 42.82 | 43.38 |
| TraesCS6B01G275000.1 | Wheat | cytosol | 42.82 | 43.26 |
| HORVU0Hr1G027000.1 | Barley | cytosol | 43.08 | 43.08 |
| HORVU0Hr1G032140.1 | Barley | cytosol | 43.08 | 43.08 |
| TraesCS6D01G232200.2 | Wheat | cytosol | 42.82 | 42.82 |
| HORVU1Hr1G056150.4 | Barley | cytosol, nucleus | 42.05 | 42.82 |
| TraesCS1A01G220700.1 | Wheat | cytosol | 41.79 | 42.45 |
| Os10t0560000-01 | Rice | cytosol | 41.03 | 42.22 |
| HORVU6Hr1G062990.1 | Barley | cytosol | 43.08 | 42.11 |
| TraesCS1B01G234200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 41.28 | 41.93 |
| Zm00001d029886_P001 | Maize | vacuole | 41.54 | 40.91 |
| Zm00001d000175_P001 | Maize | plastid | 41.54 | 40.81 |
| TraesCS3A01G147100.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 40.26 | 40.78 |
| TraesCS4D01G363600.1 | Wheat | mitochondrion, nucleus | 41.28 | 40.66 |
| EER94492 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 42.82 | 40.63 |
| TraesCS5A01G540500.1 | Wheat | cytosol | 37.69 | 39.62 |
| TraesCS4B01G373700.1 | Wheat | nucleus | 40.51 | 39.3 |
| TraesCS5A01G540300.1 | Wheat | extracellular | 41.03 | 39.22 |
| TraesCS1D01G222200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 41.28 | 38.8 |
| Zm00001d051361_P001 | Maize | plastid | 40.77 | 37.06 |
| KXG31087 | Sorghum | nucleus | 40.26 | 36.77 |
| PGSC0003DMT400024848 | Potato | cytosol | 37.69 | 35.42 |
| PGSC0003DMT400016521 | Potato | nucleus | 36.67 | 30.69 |
| PGSC0003DMT400049811 | Potato | plastid | 32.82 | 26.5 |
| PGSC0003DMT400029034 | Potato | cytosol | 25.13 | 25.13 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400012161 | EnsemblPlantsGene:PGSC0003DMG400004767 | EntrezGene:102590680 | InterPro:DUF828 | InterPro:PH_pln | PANTHER:PTHR31351 |
| PANTHER:PTHR31351:SF2 | PFAM:PF05703 | PFAM:PF08458 | PGSC:PGSC0003DMG400004767 | RefSeq:XP_015167851.1 | SEG:seg |
| UniParc:UPI000295189D | UniProt:M1A0U2 | MapMan:35.1 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400004767]
Coordinates
chr8:-:52144937..52148867
Molecular Weight (calculated)
43281.4 Da
IEP (calculated)
8.234
GRAVY (calculated)
-0.498
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MEENYLLGWK KNNDLDNWLS SVEEDEEMDV ELPSVHQPQT PMEPMDFLSR SWSLSASELS KALAKNQKHY SFERKFSVIN ESVSPPPQLP ETKMLNSQNG
101: RKPGGIGRWF HHKDSNNSSV KKKEKARLEN AHMHTVLSIA GLAAALAAAA AAENSNGSSS KMSMALASAT ELLASHCLEM AESAGADHDR VASVVRSAVD
201: IHSASDLVTL TAAAATALRG EAALKSRLPK EAKRNASISP CDRSMVEAQS FATVFPNEMD EHDSPFAGEL LHLTRKGLQR WKRVSVYINK KSQVVIKLKS
301: KHVGGAFSKN NKCVVYEVCD ESEPWLFNKE IESLDLYLRV KTAQGLLEFK CKSKSHKQKW VDGIQKLLDK TSLYEDTEGS MTMLKINKSF
101: RKPGGIGRWF HHKDSNNSSV KKKEKARLEN AHMHTVLSIA GLAAALAAAA AAENSNGSSS KMSMALASAT ELLASHCLEM AESAGADHDR VASVVRSAVD
201: IHSASDLVTL TAAAATALRG EAALKSRLPK EAKRNASISP CDRSMVEAQS FATVFPNEMD EHDSPFAGEL LHLTRKGLQR WKRVSVYINK KSQVVIKLKS
301: KHVGGAFSKN NKCVVYEVCD ESEPWLFNKE IESLDLYLRV KTAQGLLEFK CKSKSHKQKW VDGIQKLLDK TSLYEDTEGS MTMLKINKSF
001: MESGFYSDWK DTSSSSFFGS ENMEEELEDG VLRAEELFSS IPQPQTPKEP MEFLSRSWSL STSEISKALA LKHRQQQDQF CVGQNSPPVL FPDAAADPLV
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT
Arabidopsis Description
At4g17350 [Source:UniProtKB/TrEMBL;Acc:Q5U1F1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.