Factsheet for Bra026246.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65120	Canola	cytosol	99.26	99.26
AT4G17350.1	Thale cress	cytosol	90.07	89.63
Bra024944.1-P	Field mustard	cytosol	73.2	72.84
KRH28119	Soybean	nucleus	55.34	57.03
KRH04152	Soybean	nucleus	55.09	56.49
KRH57434	Soybean	nucleus	53.35	54.57
KRH77342	Soybean	cytosol, endoplasmic reticulum, nucleus	52.61	54.22
PGSC0003DMT400012161	Potato	nucleus	51.36	53.08
Solyc08g078500.2.1	Tomato	cytosol	51.12	52.82
GSMUA_Achr8P11040_001	Banana	cytosol	40.69	48.96
GSMUA_Achr11P...	Banana	nucleus	46.9	47.73
Os10t0560000-01	Rice	cytosol	43.92	46.7
HORVU0Hr1G027000.1	Barley	cytosol	43.18	44.62
HORVU0Hr1G032140.1	Barley	cytosol	43.18	44.62
TraesCS6A01G250400.1	Wheat	cytosol	42.43	44.42
TraesCS6B01G275000.1	Wheat	cytosol	42.43	44.3
HORVU6Hr1G062990.1	Barley	cytosol	43.18	43.61
Zm00001d000175_P001	Maize	plastid	42.93	43.58
TraesCS6D01G232200.2	Wheat	cytosol	41.94	43.33
TraesCS1A01G220700.1	Wheat	cytosol	41.19	43.23
HORVU1Hr1G056150.4	Barley	cytosol, nucleus	40.69	42.82
Bra038497.1-P	Field mustard	nucleus	45.66	42.69
TraesCS1B01G234200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	40.45	42.45
EER94492	Sorghum	cytosol, endoplasmic reticulum, nucleus	42.18	41.36
TraesCS3A01G147100.2	Wheat	cytosol, endoplasmic reticulum, nucleus	39.45	41.3
Zm00001d029886_P001	Maize	vacuole	40.45	41.16
TraesCS5A01G540500.1	Wheat	cytosol	37.47	40.7
TraesCS4D01G363600.1	Wheat	mitochondrion, nucleus	39.95	40.66
KXG31087	Sorghum	nucleus	42.68	40.28
TraesCS1D01G222200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	40.94	39.76
TraesCS5A01G540300.1	Wheat	extracellular	40.2	39.71
TraesCS4B01G373700.1	Wheat	nucleus	39.21	39.3
Zm00001d051361_P001	Maize	plastid	41.19	38.69
Bra036892.1-P	Field mustard	nucleus	34.49	29.7
Bra039719.1-P	Field mustard	nucleus	33.99	29.46
Bra011382.1-P	Field mustard	cytosol	31.02	29.27
Bra033702.1-P	Field mustard	cytosol, plastid	30.52	28.94
Bra023803.1-P	Field mustard	cytosol	32.51	28.48
Bra036001.1-P	Field mustard	nucleus	31.27	27.94
Bra040444.1-P	Field mustard	plastid	31.51	26.13
Bra020413.1-P	Field mustard	cytosol	22.83	22.28
Bra002698.1-P	Field mustard	cytosol	21.59	21.32

Protein Annotations

EnsemblPlants:Bra026246.1	EnsemblPlants:Bra026246.1-P	EnsemblPlantsGene:Bra026246	InterPro:DUF828	InterPro:PH_pln	PANTHER:PTHR31351
PANTHER:PTHR31351:SF2	PFAM:PF05703	PFAM:PF08458	SEG:seg	UniParc:UPI0002544138	UniProt:M4EBT7
MapMan:35.1	:	:	:	:	:

Description

AT4G17350 (E=4e-167) | phosphoinositide binding

Coordinates

chrA01:-:10429693..10431714

Molecular Weight (calculated)

44508.9 Da

IEP (calculated)

9.654

GRAVY (calculated)

-0.475

Length

403 amino acids

Sequence
(BLAST)

001: MERGGFYPDW KDTSSSLFGS ENMEEELEEA EELFSSIPQP QTPKEPMEFL SRSWSLSTSE IAKALALKHR QQQEQLCVAQ NNTPVLFPDA AAAHPLMTGK
101: IMNSFGTRRA GTLSKWFHHH REHSSSSNTT NYLKKKDKAR VENAHVHSAV SIAALAAGVA SVTSVSNCKG SSSKMALALG SATELLASHC VEMAERAGAD
201: RARVASTVRS SVDIHSPGDL MTLTAAAATA LRGEAALKAR QPKEARKNAA ITPFERSFSD SHWPANFQFR LEEPNLPLEG ELLQCARNGV QRTKRVCVYI
301: NKKSQVIIKL KSKHVGGAFS KKIKCIVYGV CDEKSAWPYR KERENSEEVY FGLKTGQGLL EFKCKNKVHK QRWVDGAQSL LRQVNCFEAA KCSLGSLSLT
401: NHR

Best Arabidopsis Sequence Match ( AT4G17350.1 )
(BLAST)

001: MESGFYSDWK DTSSSSFFGS ENMEEELEDG VLRAEELFSS IPQPQTPKEP MEFLSRSWSL STSEISKALA LKHRQQQDQF CVGQNSPPVL FPDAAADPLV
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT

Arabidopsis Description

At4g17350 [Source:UniProtKB/TrEMBL;Acc:Q5U1F1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.