Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G352200.1 | Wheat | cytosol | 85.09 | 23.04 |
| TraesCS2A01G355900.2 | Wheat | cytosol | 84.21 | 22.8 |
| TraesCS2B01G372200.1 | Wheat | cytosol | 83.33 | 22.57 |
| OQU81872 | Sorghum | cytosol | 78.07 | 22.08 |
| Zm00001d003160_P001 | Maize | cytosol | 74.56 | 21.04 |
| Zm00001d025771_P001 | Maize | cytosol | 77.19 | 20.61 |
| GSMUA_Achr4P02070_001 | Banana | cytosol | 63.16 | 18.56 |
| GSMUA_Achr10P... | Banana | cytosol | 62.28 | 18.39 |
| VIT_11s0037g01110.t01 | Wine grape | cytosol | 57.89 | 17.55 |
| Solyc07g006320.2.1 | Tomato | cytosol | 59.65 | 17.44 |
| PGSC0003DMT400029034 | Potato | cytosol | 59.65 | 17.44 |
| VIT_11s0037g01240.t01 | Wine grape | cytosol | 57.02 | 16.58 |
| KRH18946 | Soybean | nucleus | 55.26 | 16.28 |
| KRH02952 | Soybean | cytosol | 54.39 | 16.15 |
| Bra020413.1-P | Field mustard | cytosol | 55.26 | 15.25 |
| AT5G57770.1 | Thale cress | cytosol | 52.63 | 14.78 |
| CDY02766 | Canola | cytosol | 52.63 | 14.49 |
| Bra002698.1-P | Field mustard | cytosol | 51.75 | 14.46 |
| CDY51283 | Canola | cytosol | 51.75 | 14.39 |
| CDY50798 | Canola | cytosol, endoplasmic reticulum, nucleus | 51.75 | 14.36 |
| Os12t0604200-00 | Rice | nucleus | 44.74 | 13.75 |
| Os03t0635800-01 | Rice | nucleus | 42.11 | 12.7 |
| Os10t0560000-01 | Rice | cytosol | 30.7 | 9.23 |
| Os01t0231600-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os04t0498000-01 | EnsemblPlantsGene:Os04g0498000 | InterPro:DUF828 | PANTHER:PTHR31351 | PANTHER:PTHR31351:SF3 | PFAM:PF05703 |
| ProteinID:BAF15124.1 | ProteinID:BAS89905.1 | SEG:seg | UniParc:UPI0000DD9161 | UniProt:Q0JC13 | MapMan:35.2 |
Description
Protein of unknown function DUF828, plant family protein. (Os04t0498000-01)
Coordinates
chr4:+:24898873..24900756
Molecular Weight (calculated)
12016.4 Da
IEP (calculated)
10.206
GRAVY (calculated)
-0.230
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: IHPELDYDLK KKWLPRKMAP WSGISLKKWV KERKQKRKEE ARLHKAEVHA AVSVAGVAAA LAAIAAESST PAATMKETAV ASAAALVAAA AASPSELTGR
101: RGDAADALHE PDAV
101: RGDAADALHE PDAV
001: MELSLALTST DHNPSPSEAH PDTMDFLSRE WCNFAVQSLH PDPILYDRSI VPVETSIAKF QGDSSPVSCA MMDTSMKMDD PDFKPSMPSW KTNDVKSWIW
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESM QLASQSFFLF
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESM QLASQSFFLF
Arabidopsis Description
Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region [Source:TAIR;Acc:AT5G57770]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.