Factsheet for Solyc07g006320.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029034	Potato	cytosol	96.67	96.67
VIT_11s0037g01240.t01	Wine grape	cytosol	70.77	70.41
VIT_11s0037g01110.t01	Wine grape	cytosol	67.69	70.21
KRH18946	Soybean	nucleus	65.64	66.15
KRH02952	Soybean	cytosol	64.62	65.62
Os04t0498000-01	Rice	cytosol	17.44	59.65
AT5G57770.1	Thale cress	cytosol	60.51	58.13
CDY02766	Canola	cytosol	60.77	57.25
Bra002698.1-P	Field mustard	cytosol	59.74	57.11
Bra020413.1-P	Field mustard	cytosol	60.26	56.9
CDY51283	Canola	cytosol	59.49	56.59
CDY50798	Canola	cytosol, endoplasmic reticulum, nucleus	58.21	55.23
GSMUA_Achr4P02070_001	Banana	cytosol	47.18	47.42
GSMUA_Achr10P...	Banana	cytosol	46.41	46.89
OQU81872	Sorghum	cytosol	40.77	39.45
TraesCS2D01G352200.1	Wheat	cytosol	42.31	39.19
TraesCS2A01G355900.2	Wheat	cytosol	42.05	38.95
TraesCS2B01G372200.1	Wheat	cytosol	41.79	38.72
Zm00001d003160_P001	Maize	cytosol	38.72	37.38
Zm00001d025771_P001	Maize	cytosol	39.23	35.83
Solyc09g082580.2.1	Tomato	cytosol	32.05	26.88
Solyc08g066860.2.1	Tomato	nucleus	27.18	25.54
Solyc09g065590.2.1	Tomato	plastid	31.54	25.26
Solyc08g078500.2.1	Tomato	cytosol	24.87	24.87

Protein Annotations

EnsemblPlants:Solyc07g006320.2.1	EnsemblPlantsGene:Solyc07g006320.2	InterPro:DUF828	InterPro:PH_pln	ncoils:Coil	PANTHER:PTHR31351
PANTHER:PTHR31351:SF3	PFAM:PF05703	PFAM:PF08458	SEG:seg	UniParc:UPI000276C58E	UniProt:K4CBA3
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7:+:1142842..1146191

Molecular Weight (calculated)

43535.1 Da

IEP (calculated)

8.638

GRAVY (calculated)

-0.397

Length

390 amino acids

Sequence
(BLAST)

001: MDLDSNPTIS QAHPETMDFL SRTWCNFAVQ AFQPEMQDQA LILHETSIKS LSIDNKPPLP KMDKSMKMDD ADNSIPPWKS NDVKSWIWMQ QAMHPEVNYN
101: SYFQKKWMPW NIGPLKNVSI KKWIKEIKQK RKEEKRLQKA EVHAAISVAG VAAALAAIAA ENMNHDQSGC TKESAVASAA ALVAAQCAQV AEAMGAKRDQ
201: ISSVIGSAMT GTSASDILTL TAAATTSLRG AETLKARSGY KNILNGSTPV LPIEDSNDYN FNHEKCRSIL SKGADLYIEK SEGRSKLRSV SIMLNSEAKV
301: ILRTRKPTML KTFSSQAESV VLDLHAELYK DSNGAETDSC YLIVLTTNRG VIKLDMMDDY QRYKMWSMTI NQMLTLSTSF TKYELQYYKS

Best Arabidopsis Sequence Match ( AT5G57770.1 )
(BLAST)

001: MELSLALTST DHNPSPSEAH PDTMDFLSRE WCNFAVQSLH PDPILYDRSI VPVETSIAKF QGDSSPVSCA MMDTSMKMDD PDFKPSMPSW KTNDVKSWIW
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESI VTNVHVELYK DSDSEDNNIE DTCYLIVLRT NRGAIKLDMA DDYNRYKTWV TTIQHMLTLS SSSLSTNYAL
401: TFYNKN

Arabidopsis Description

Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region [Source:TAIR;Acc:AT5G57770]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.