Factsheet for VIT_11s0037g01240.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0037g01110.t01	Wine grape	cytosol	89.03	92.82
Solyc07g006320.2.1	Tomato	cytosol	70.41	70.77
PGSC0003DMT400029034	Potato	cytosol	69.9	70.26
KRH18946	Soybean	nucleus	66.84	67.7
KRH02952	Soybean	cytosol	65.31	66.67
AT5G57770.1	Thale cress	cytosol	60.71	58.62
Bra020413.1-P	Field mustard	cytosol	60.97	57.87
Bra002698.1-P	Field mustard	cytosol	59.69	57.35
CDY02766	Canola	cytosol	60.46	57.25
CDY51283	Canola	cytosol	59.69	57.07
Os04t0498000-01	Rice	cytosol	16.58	57.02
CDY50798	Canola	cytosol, endoplasmic reticulum, nucleus	58.93	56.2
GSMUA_Achr4P02070_001	Banana	cytosol	48.98	49.48
GSMUA_Achr10P...	Banana	cytosol	47.45	48.19
OQU81872	Sorghum	cytosol	42.86	41.69
TraesCS2A01G355900.2	Wheat	cytosol	43.37	40.38
TraesCS2D01G352200.1	Wheat	cytosol	43.11	40.14
TraesCS2B01G372200.1	Wheat	cytosol	42.86	39.91
Zm00001d003160_P001	Maize	cytosol	40.31	39.11
Zm00001d025771_P001	Maize	cytosol	41.33	37.94
VIT_05s0020g04020.t01	Wine grape	nucleus	31.38	26.68
VIT_07s0151g00290.t01	Wine grape	nucleus	30.61	25.1
VIT_04s0008g03570.t01	Wine grape	cytosol, nucleus, plastid	25.0	23.11

Protein Annotations

ArrayExpress:VIT_11s0037g01240	EMBL:AM481892	EMBL:FN596499	EnsemblPlants:VIT_11s0037g01240.t01	EnsemblPlantsGene:VIT_11s0037g01240	EntrezGene:100265570
InterPro:DUF828	InterPro:PH_pln	PANTHER:PTHR31351	PANTHER:PTHR31351:SF3	PFAM:PF05703	PFAM:PF08458
ProteinID:CAN81813	ProteinID:CAN81813.1	ProteinID:CBI36614	ProteinID:CBI36614.3	RefSeq:XP_010656652.1	SEG:seg
UniParc:UPI00015C94ED	UniProt:D7U1J8	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr11:+:10541024..10543466

Molecular Weight (calculated)

43655.3 Da

IEP (calculated)

8.730

GRAVY (calculated)

-0.319

Length

392 amino acids

Sequence
(BLAST)

001: MDPDFKPTIS EAHPETMDFL SRAWCNFAVQ AIQPELQDQS VVILDNPIKK FGNDTKAPFP KMDNSVKMDD AGIKSPPPWK TNDVKSWIWM QQAMHPELNY
101: NSYFRKKWIS WKIMPLGSNI SIKKWFKDIK LKRKEEDRLQ RAEVYAAISV AGVAAALAAI AAENPKQDHS NATKESAVAS AAALVAAQCA QVAEAMGAKR
201: EQLSTVMCSA MSGTSASDIL TLTAAAATSL KGAATLKGRA GYKNRLNGSA PVLPIEESNE LDSDLEKHRS MLAKGAQLTF HTSDGRCLLR SVSIILNSQA
301: KVILKIRKLN LMNTFSRKKE SIIQDLHAEL YDDSEADERN TCYLIVLTTN CGTIKLDMGD DYHLYKIWAT TVNHMLTFST SFTRYELQFY KS

Best Arabidopsis Sequence Match ( AT5G57770.1 )
(BLAST)

001: MELSLALTST DHNPSPSEAH PDTMDFLSRE WCNFAVQSLH PDPILYDRSI VPVETSIAKF QGDSSPVSCA MMDTSMKMDD PDFKPSMPSW KTNDVKSWIW
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESI VTNVHVELYK DSDSEDNNIE DTCYLIVLRT NRGAIKLDMA DDYNRYKTWV TTIQHMLTLS SSSLSTNYAL
401: TFYNKN

Arabidopsis Description

Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region [Source:TAIR;Acc:AT5G57770]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.