Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02766 | Canola | cytosol | 91.87 | 90.1 |
| Bra020413.1-P | Field mustard | cytosol | 90.89 | 89.35 |
| Bra002698.1-P | Field mustard | cytosol | 89.41 | 88.97 |
| CDY51283 | Canola | cytosol | 89.41 | 88.54 |
| CDY50798 | Canola | cytosol, endoplasmic reticulum, nucleus | 86.21 | 85.16 |
| VIT_11s0037g01240.t01 | Wine grape | cytosol | 58.62 | 60.71 |
| Solyc07g006320.2.1 | Tomato | cytosol | 58.13 | 60.51 |
| VIT_11s0037g01110.t01 | Wine grape | cytosol | 55.91 | 60.37 |
| PGSC0003DMT400029034 | Potato | cytosol | 57.39 | 59.74 |
| KRH02952 | Soybean | cytosol | 56.16 | 59.38 |
| KRH18946 | Soybean | nucleus | 56.16 | 58.91 |
| Os04t0498000-01 | Rice | cytosol | 14.78 | 52.63 |
| GSMUA_Achr10P... | Banana | cytosol | 41.87 | 44.04 |
| GSMUA_Achr4P02070_001 | Banana | cytosol | 41.87 | 43.81 |
| TraesCS2A01G355900.2 | Wheat | cytosol | 42.86 | 41.33 |
| TraesCS2D01G352200.1 | Wheat | cytosol | 42.86 | 41.33 |
| OQU81872 | Sorghum | cytosol | 40.39 | 40.69 |
| TraesCS2B01G372200.1 | Wheat | cytosol | 42.12 | 40.62 |
| Zm00001d003160_P001 | Maize | cytosol | 39.66 | 39.85 |
| Zm00001d025771_P001 | Maize | cytosol | 40.39 | 38.41 |
| AT5G43870.1 | Thale cress | plastid | 28.82 | 25.83 |
| AT3G22810.1 | Thale cress | cytosol | 29.31 | 25.21 |
| AT3G63300.1 | Thale cress | plastid | 30.79 | 25.1 |
| AT4G14740.1 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 28.57 | 24.42 |
| AT4G32780.2 | Thale cress | cytosol | 24.38 | 23.24 |
| AT4G17350.1 | Thale cress | cytosol | 22.66 | 22.72 |
| AT5G47440.1 | Thale cress | nucleus | 22.66 | 22.66 |
| AT4G16670.1 | Thale cress | cytosol | 22.17 | 20.98 |
Protein Annotations
| MapMan:35.2 | EntrezGene:835885 | UniProt:A0A178UC61 | ProteinID:AED96948.1 | ArrayExpress:AT5G57770 | EnsemblPlantsGene:AT5G57770 |
| RefSeq:AT5G57770 | TAIR:AT5G57770 | RefSeq:AT5G57770-TAIR-G | EnsemblPlants:AT5G57770.1 | TAIR:AT5G57770.1 | Unigene:At.70163 |
| InterPro:DUF828 | UniProt:F4KC40 | GO:GO:0008150 | RefSeq:NP_200585.3 | ProteinID:OAO91438.1 | PFAM:PF05703 |
| PFAM:PF08458 | InterPro:PH_pln | PO:PO:0000293 | PO:PO:0009005 | PANTHER:PTHR31351 | PANTHER:PTHR31351:SF3 |
| UniParc:UPI000152B3BF | SEG:seg | : | : | : | : |
Description
Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region [Source:TAIR;Acc:AT5G57770]
Coordinates
chr5:-:23400864..23403150
Molecular Weight (calculated)
44871.6 Da
IEP (calculated)
8.445
GRAVY (calculated)
-0.368
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MELSLALTST DHNPSPSEAH PDTMDFLSRE WCNFAVQSLH PDPILYDRSI VPVETSIAKF QGDSSPVSCA MMDTSMKMDD PDFKPSMPSW KTNDVKSWIW
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESI VTNVHVELYK DSDSEDNNIE DTCYLIVLRT NRGAIKLDMA DDYNRYKTWV TTIQHMLTLS SSSLSTNYAL
401: TFYNKN
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESI VTNVHVELYK DSDSEDNNIE DTCYLIVLRT NRGAIKLDMA DDYNRYKTWV TTIQHMLTLS SSSLSTNYAL
401: TFYNKN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.