Factsheet for VIT_11s0037g01110.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0037g01240.t01	Wine grape	cytosol	92.82	89.03
Solyc07g006320.2.1	Tomato	cytosol	70.21	67.69
PGSC0003DMT400029034	Potato	cytosol	69.68	67.18
KRH18946	Soybean	nucleus	66.76	64.86
KRH02952	Soybean	cytosol	65.69	64.32
Os04t0498000-01	Rice	cytosol	17.55	57.89
AT5G57770.1	Thale cress	cytosol	60.37	55.91
Bra002698.1-P	Field mustard	cytosol	60.11	55.39
Bra020413.1-P	Field mustard	cytosol	60.64	55.21
CDY51283	Canola	cytosol	60.11	55.12
CDY02766	Canola	cytosol	60.11	54.59
CDY50798	Canola	cytosol, endoplasmic reticulum, nucleus	59.31	54.26
GSMUA_Achr4P02070_001	Banana	cytosol	49.73	48.2
GSMUA_Achr10P...	Banana	cytosol	48.67	47.41
OQU81872	Sorghum	cytosol	42.29	39.45
TraesCS2A01G355900.2	Wheat	cytosol	43.35	38.72
TraesCS2D01G352200.1	Wheat	cytosol	43.09	38.48
TraesCS2B01G372200.1	Wheat	cytosol	42.82	38.24
Zm00001d003160_P001	Maize	cytosol	40.16	37.38
Zm00001d025771_P001	Maize	cytosol	41.22	36.3
VIT_05s0020g04020.t01	Wine grape	nucleus	32.45	26.46
VIT_07s0151g00290.t01	Wine grape	nucleus	31.91	25.1
VIT_04s0008g03570.t01	Wine grape	cytosol, nucleus, plastid	25.8	22.88

Protein Annotations

ArrayExpress:VIT_11s0037g01110	EMBL:AM433023	EMBL:FN596499	EnsemblPlants:VIT_11s0037g01110.t01	EnsemblPlantsGene:VIT_11s0037g01110	InterPro:DUF828
InterPro:PH_pln	PANTHER:PTHR31351	PANTHER:PTHR31351:SF3	PFAM:PF05703	PFAM:PF08458	ProteinID:CAN67054
ProteinID:CAN67054.1	ProteinID:CCB59802	ProteinID:CCB59802.1	SEG:seg	UniParc:UPI000210831E	UniProt:F6HYN8
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr11:-:10134887..10137254

Molecular Weight (calculated)

41537.8 Da

IEP (calculated)

9.192

GRAVY (calculated)

-0.253

Length

376 amino acids

Sequence
(BLAST)

001: MDFLSPAWCN FAVQAIQPEL QDQSLVILDN PIKKFGYDTK APFPKMDQSV KVDDAGIKSP PAWKPNDVKS WIWMQQAMHP ELNYNSYFRK KWLSWKIMPF
101: GSSVSIKKWF KDIKLKRKEE GRLQRAEVHA AISVAGVAAA LAAIAAESSK QDQSNATKES AVASAAALVA AQCAQVAEAM GAKREHLSTV MSSAMSGTSA
201: SDILTLTAAA ATSLKGAATL KARAGYKNRL NGSAPVLPIE ESNEPDSDLE KHRTMLAKGA QLTIHTSDGR CLLRSVSIIL NSQAKVILKI RKLNLMNTFS
301: SKKESIIQDL HAELYDDSEA DETNTCYLIV LTTNHGTIKL DMGDDYHLYK IWATTVNHML TLSTSFTRYE LQFYKT

Best Arabidopsis Sequence Match ( AT5G57770.1 )
(BLAST)

001: MELSLALTST DHNPSPSEAH PDTMDFLSRE WCNFAVQSLH PDPILYDRSI VPVETSIAKF QGDSSPVSCA MMDTSMKMDD PDFKPSMPSW KTNDVKSWIW
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESI VTNVHVELYK DSDSEDNNIE DTCYLIVLRT NRGAIKLDMA DDYNRYKTWV TTIQHMLTLS SSSLSTNYAL
401: TFYNKN

Arabidopsis Description

Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region [Source:TAIR;Acc:AT5G57770]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.