CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18946	Soybean	nucleus	95.83	95.09
VIT_11s0037g01110.t01	Wine grape	cytosol	64.32	65.69
VIT_11s0037g01240.t01	Wine grape	cytosol	66.67	65.31
PGSC0003DMT400029034	Potato	cytosol	66.15	65.13
Solyc07g006320.2.1	Tomato	cytosol	65.62	64.62
AT5G57770.1	Thale cress	cytosol	59.38	56.16
Bra002698.1-P	Field mustard	cytosol	59.64	56.13
Bra020413.1-P	Field mustard	cytosol	60.16	55.93
CDY51283	Canola	cytosol	59.64	55.85
CDY02766	Canola	cytosol	59.9	55.56
Os04t0498000-01	Rice	cytosol	16.15	54.39
CDY50798	Canola	cytosol, endoplasmic reticulum, nucleus	57.81	54.01
GSMUA_Achr10P...	Banana	cytosol	45.31	45.08
GSMUA_Achr4P02070_001	Banana	cytosol	45.05	44.59
OQU81872	Sorghum	cytosol	40.36	38.46
TraesCS2B01G372200.1	Wheat	cytosol	41.93	38.24
TraesCS2A01G355900.2	Wheat	cytosol	41.93	38.24
TraesCS2D01G352200.1	Wheat	cytosol	41.67	38.0
Zm00001d003160_P001	Maize	cytosol	39.06	37.13
Zm00001d025771_P001	Maize	cytosol	39.06	35.13
KRH67258	Soybean	nucleus	26.82	26.96
KRG91356	Soybean	cytosol	32.81	26.47
KRH35470	Soybean	nucleus	32.03	25.84
KRH69115	Soybean	nucleus	32.29	25.51
KRH31661	Soybean	nucleus	32.03	25.47
KRG95576	Soybean	nucleus	30.47	24.12
KRH62055	Soybean	cytosol, extracellular, nucleus, plastid	25.78	23.97
KRH71381	Soybean	nucleus	29.17	23.28
KRH32056	Soybean	nucleus	28.91	23.08
KRH52723	Soybean	cytosol, extracellular, nucleus, plastid	25.26	22.93
KRH04152	Soybean	nucleus	23.18	22.65
KRH57434	Soybean	nucleus	22.92	22.34
KRH77342	Soybean	cytosol, endoplasmic reticulum, nucleus	22.14	21.74
KRH28119	Soybean	nucleus	22.14	21.74

Protein Annotations

EMBL:ACUP02010331	EnsemblPlants:KRH02952	EnsemblPlantsGene:GLYMA_17G068700	EntrezGene:100814258	InterPro:DUF828	InterPro:PH_pln
PANTHER:PTHR31351	PANTHER:PTHR31351:SF3	PFAM:PF05703	PFAM:PF08458	ProteinID:KRH02952	ProteinID:KRH02952.1
SEG:seg	UniParc:UPI0001D840F2	UniProt:I1MSW9	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr17:-:5356610..5359298

Molecular Weight (calculated)

42341.9 Da

IEP (calculated)

9.081

GRAVY (calculated)

-0.255

Length

384 amino acids

Sequence
(BLAST)

001: MASDFNLSPS DAHPETMDFL SLAWCNFAVQ ALQPEPQHGS VVLLDNNSMK QLEPSSPNAP PSMEKSDRMD GADFGSFPAW KSNNVKSWIW MQQAMHPELN
101: YNSCFRKKWM PWKQIIPLKN VSIKKWFKEI KMKRKEDQRL QRAEVHAAIS VAGIAAALAA IAAESSKNES NQDRDAAVAS AAALVAAQCA KVAEAMGAKK
201: ELLSTVIGSA MSGTSASDIL TLTGAAATSL KGAATLKVRS GCKNRLNGGV PILPLEDNND LDFDFEKGRS ILAQGAELYV ETPEGKYMPR SVSVILNSEA
301: KVVLMMRKHN LFKSKREGVV MTLHADLYKG SEADTCYLIV LTTRGGVFKL DMADDFRRYK TWATTINHML KISSSFAKYE LQFY

Best Arabidopsis Sequence Match ( AT5G57770.1 )
(BLAST)

001: MELSLALTST DHNPSPSEAH PDTMDFLSRE WCNFAVQSLH PDPILYDRSI VPVETSIAKF QGDSSPVSCA MMDTSMKMDD PDFKPSMPSW KTNDVKSWIW
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESI VTNVHVELYK DSDSEDNNIE DTCYLIVLRT NRGAIKLDMA DDYNRYKTWV TTIQHMLTLS SSSLSTNYAL
401: TFYNKN

Arabidopsis Description

Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region [Source:TAIR;Acc:AT5G57770]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.