Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35470 | Soybean | nucleus | 95.17 | 95.17 |
| VIT_05s0020g04020.t01 | Wine grape | nucleus | 80.67 | 83.3 |
| KRH31661 | Soybean | nucleus | 81.09 | 79.92 |
| KRH69115 | Soybean | nucleus | 80.88 | 79.22 |
| PGSC0003DMT400016521 | Potato | nucleus | 75.21 | 76.82 |
| Solyc09g082580.2.1 | Tomato | cytosol | 75.0 | 76.77 |
| Bra036892.1-P | Field mustard | nucleus | 72.9 | 74.15 |
| Bra039719.1-P | Field mustard | nucleus | 72.06 | 73.76 |
| CDY50683 | Canola | cytosol, endoplasmic reticulum, nucleus | 72.06 | 73.76 |
| CDY29764 | Canola | nucleus | 68.28 | 73.36 |
| AT4G14740.1 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 73.11 | 73.26 |
| CDY36869 | Canola | nucleus, plastid | 26.47 | 72.41 |
| CDY16256 | Canola | cytosol | 60.5 | 72.0 |
| AT3G22810.1 | Thale cress | cytosol | 70.8 | 71.4 |
| KRH67258 | Soybean | nucleus | 56.51 | 70.42 |
| GSMUA_Achr5P02990_001 | Banana | nucleus | 66.6 | 69.82 |
| Bra033702.1-P | Field mustard | cytosol, plastid | 62.18 | 69.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 65.34 | 68.5 |
| GSMUA_Achr7P07730_001 | Banana | nucleus | 63.87 | 68.31 |
| GSMUA_Achr4P21170_001 | Banana | cytosol | 52.52 | 68.12 |
| CDY22328 | Canola | plastid | 64.29 | 67.85 |
| Bra023803.1-P | Field mustard | cytosol | 65.13 | 67.39 |
| CDX94730 | Canola | cytosol | 63.45 | 67.26 |
| AT5G43870.1 | Thale cress | plastid | 63.66 | 66.89 |
| CDY14898 | Canola | cytosol | 63.03 | 66.52 |
| Bra036001.1-P | Field mustard | nucleus | 62.82 | 66.3 |
| CDY36868 | Canola | nucleus | 31.93 | 66.09 |
| TraesCS5A01G377600.1 | Wheat | nucleus | 63.66 | 66.01 |
| TraesCS5B01G381200.1 | Wheat | nucleus | 63.66 | 65.3 |
| TraesCS5D01G387600.1 | Wheat | nucleus | 63.45 | 65.23 |
| HORVU5Hr1G093460.2 | Barley | nucleus | 63.45 | 65.09 |
| KRG95576 | Soybean | nucleus | 66.18 | 64.95 |
| KRH32056 | Soybean | nucleus | 65.55 | 64.86 |
| KRH71381 | Soybean | nucleus | 64.71 | 64.03 |
| CDY46598 | Canola | mitochondrion | 64.92 | 63.98 |
| Zm00001d033283_P001 | Maize | cytosol | 63.24 | 63.77 |
| Zm00001d013705_P001 | Maize | cytosol, nucleus, peroxisome | 62.82 | 63.75 |
| KXG37970 | Sorghum | cytosol | 63.03 | 63.69 |
| TraesCS5A01G056700.2 | Wheat | nucleus | 60.71 | 61.36 |
| TraesCS5D01G067900.2 | Wheat | nucleus | 60.5 | 61.28 |
| TraesCS5B01G060100.2 | Wheat | nucleus | 60.29 | 61.19 |
| OQU79534 | Sorghum | cytosol, mitochondrion, nucleus | 62.4 | 60.86 |
| GSMUA_Achr4P21160_001 | Banana | cytosol | 12.39 | 60.82 |
| CDX96925 | Canola | plastid | 62.4 | 60.61 |
| Os03t0635800-01 | Rice | nucleus | 48.11 | 60.58 |
| Os12t0604200-00 | Rice | nucleus | 46.85 | 60.11 |
| Zm00001d030661_P001 | Maize | cytosol | 58.19 | 59.96 |
| KRH62055 | Soybean | cytosol, extracellular, nucleus, plastid | 37.18 | 42.86 |
| KRH52723 | Soybean | cytosol, extracellular, nucleus, plastid | 36.76 | 41.37 |
| KRH28119 | Soybean | nucleus | 31.09 | 37.85 |
| KRH77342 | Soybean | cytosol, endoplasmic reticulum, nucleus | 30.04 | 36.57 |
| KRH57434 | Soybean | nucleus | 29.83 | 36.04 |
| KRH04152 | Soybean | nucleus | 29.62 | 35.88 |
| KRH02952 | Soybean | cytosol | 26.47 | 32.81 |
| KRH18946 | Soybean | nucleus | 26.26 | 32.3 |
Protein Annotations
| EMBL:ACUP02012677 | EnsemblPlants:KRG91356 | EnsemblPlantsGene:GLYMA_20G149800 | EntrezGene:100814874 | InterPro:DUF828 | InterPro:PH_pln |
| PANTHER:PTHR31351 | PANTHER:PTHR31351:SF16 | PFAM:PF05703 | PFAM:PF08458 | ProteinID:KRG91356 | ProteinID:KRG91356.1 |
| SEG:seg | UniParc:UPI000233DE0A | UniProt:I1NGJ4 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr20:+:38859476..38863136
Molecular Weight (calculated)
50633.2 Da
IEP (calculated)
9.718
GRAVY (calculated)
-0.280
Length
476 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKAQTEPWR PDPLHSGMFR PPETPREPME FLSRSWSVSA LEVSKALSPA LSKVTLSNGA AVVAIPEDIA GEAEEASATV SGNPFSFASS ETSQMVMERI
101: MSQSQEVSPR TSGRLSHSSG PLNGTQSCGS LTDSPPVSPS EIDDIKYTRT NNIASTLSLN FRTTAPGAAP GGAGGGKTVG RWLKDRKEKK KEETRAHNAQ
201: LHAAVSVAGV AAAVAAIAAA TAATSGTGKD EEMAKTDMAV ASAATLVAAQ CVEAAEAMGA EREHLASVVS SAVNVRSAGD IMTLTAAAAT ALRGAATLKA
301: RALKEVWNIA AVIPVEKNLA AGGVNNNNAS NGNSNSSFSG ELVPEENFLG ICSRELLARG CELLKRTRKG DLHWKVVSVY INRMNQVVLK MKSRHVAGTI
401: TKKKKNVVLE VIKDVPAWPG RHLLEGGEDR RYFGLKTVMR GVVEFECRNQ REYNVWTQGV SRLLSIATEK NNKNRI
101: MSQSQEVSPR TSGRLSHSSG PLNGTQSCGS LTDSPPVSPS EIDDIKYTRT NNIASTLSLN FRTTAPGAAP GGAGGGKTVG RWLKDRKEKK KEETRAHNAQ
201: LHAAVSVAGV AAAVAAIAAA TAATSGTGKD EEMAKTDMAV ASAATLVAAQ CVEAAEAMGA EREHLASVVS SAVNVRSAGD IMTLTAAAAT ALRGAATLKA
301: RALKEVWNIA AVIPVEKNLA AGGVNNNNAS NGNSNSSFSG ELVPEENFLG ICSRELLARG CELLKRTRKG DLHWKVVSVY INRMNQVVLK MKSRHVAGTI
401: TKKKKNVVLE VIKDVPAWPG RHLLEGGEDR RYFGLKTVMR GVVEFECRNQ REYNVWTQGV SRLLSIATEK NNKNRI
001: MEKPVFAPWR SDQVFRPPET PLEPMEFLSR SWSVSAHEVS KALTPSQQLL SKASIENTTV ILEEPIAAGE TETEDNSFVS GNPFSFACSE TSQMVMDRIL
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KNVVIDVIKN VQAWPGRHLL EGGEDLRYFG LKTVPRGIVE FQCKSQREYE MWTQGVSRLI AVAAERNNRY RI
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KNVVIDVIKN VQAWPGRHLL EGGEDLRYFG LKTVPRGIVE FQCKSQREYE MWTQGVSRLI AVAAERNNRY RI
Arabidopsis Description
Auxin canalization protein (DUF828) [Source:UniProtKB/TrEMBL;Acc:Q9LUI0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.