CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52723	Soybean	cytosol, extracellular, nucleus, plastid	93.95	91.73
VIT_04s0008g03570.t01	Wine grape	cytosol, nucleus, plastid	67.07	65.33
Solyc08g066860.2.1	Tomato	nucleus	60.53	60.24
PGSC0003DMT400024848	Potato	cytosol	60.29	60.0
Os01t0231600-00	Rice	cytosol	12.35	56.04
GSMUA_Achr10P...	Banana	nucleus	50.61	51.99
CDX68890	Canola	cytosol	49.64	48.01
AT4G32780.2	Thale cress	cytosol	49.39	47.89
Bra011382.1-P	Field mustard	cytosol	49.39	47.78
CDX75286	Canola	cytosol	49.39	47.78
OQU86061	Sorghum	cytosol	46.73	45.2
Zm00001d039295_P001	Maize	cytosol	44.79	45.01
TraesCS3A01G155500.1	Wheat	cytosol	46.97	44.91
TraesCS3D01G163000.1	Wheat	cytosol	46.49	44.86
TraesCS3B01G182000.2	Wheat	mitochondrion	46.73	41.15
KRH67258	Soybean	nucleus	34.62	37.43
KRG91356	Soybean	cytosol	42.86	37.18
KRH04152	Soybean	nucleus	34.62	36.39
KRH35470	Soybean	nucleus	41.89	36.34
KRH31661	Soybean	nucleus	41.4	35.4
KRH69115	Soybean	nucleus	41.65	35.39
KRH28119	Soybean	nucleus	33.41	35.29
KRH57434	Soybean	nucleus	33.66	35.28
KRG95576	Soybean	nucleus	41.16	35.05
KRH77342	Soybean	cytosol, endoplasmic reticulum, nucleus	33.17	35.04
KRH32056	Soybean	nucleus	40.19	34.51
KRH71381	Soybean	nucleus	39.71	34.1
HORVU3Hr1G031590.6	Barley	cytosol, nucleus, plastid	44.79	27.17
KRH18946	Soybean	nucleus	24.46	26.1
KRH02952	Soybean	cytosol	23.97	25.78

Protein Annotations

EMBL:ACUP02002216	EnsemblPlants:KRH62055	EnsemblPlantsGene:GLYMA_04G083000	EntrezGene:100814154	Gene3D:2.30.29.30	InterPro:DUF828
InterPro:IPR001849	InterPro:IPR011993	InterPro:PH-like_dom_sf	InterPro:PH_domain	InterPro:PH_pln	PANTHER:PTHR31351
PANTHER:PTHR31351:SF7	PFAM:PF05703	PFAM:PF08458	PFscan:PS50003	ProteinID:KRH62055	ProteinID:KRH62055.1
SEG:seg	SUPFAM:SSF50729	UniParc:UPI000295720B	UniProt:K7KIW2	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr4:+:7002219..7006087

Molecular Weight (calculated)

44904.8 Da

IEP (calculated)

9.084

GRAVY (calculated)

-0.325

Length

413 amino acids

Sequence
(BLAST)

001: MSPSASNSIC SVHQLENIDE NAPADWPASS CPPPDTPTES MEFLARSWSL SAMELSKALH STNVTISTGI EMPLSCPSGH QFDTKSSTAS KALSNGCFPP
101: FLPKDSNEKK DLLLLHQALN PEFLSSQNLL RNGLYRSLLR GRTMGRWLKD QKERKKQEIR THNAHLHAAV SVAGVAAAIA AVAASTASPE MPYANQKNPP
201: PASSAIASAA ALVASHCIEI AEDMGAEHDQ ILTVVNSAIN AKTNGDIMTL TAGAATALRG AATLKARLQK GPGATSIPLV EEKCDERKEA NILTALDYVF
301: RGGELLKRTR KGALHWKQVS FNINSNLQVV VKMKSKHMAG TFTKKKKYIV TGVCNDIPAW PGREKEDISE KRAYFGIKTT DRTIEFECGS KGDKQFWLEG
401: IQYMLNCRVK VTL

Best Arabidopsis Sequence Match ( AT4G32780.1 )
(BLAST)

001: MMCHTGRDNS WKKLENIDEE GPSTVAREVR TALPPETPTE MMEFLGRSWS ISAVELTRAF FNNSTADTNS FLLSTIVNTN KEDREDEEDS TSMASSRDLL
101: LPHVGNKTSP PITPRTGREM KHLYKSMIRG RTMGRRLKDQ KEKKKQETRT RNAEIHAAVS VAGVAAVVAA TAASNAIAAA EDAVESTTVA AAMASAAALI
201: ASHCIEIAGE IGAGYNQIAT AVSSATNART NGDIMALTAS AATALRGAAI LRSRMERNNE NKAMLYATKE HVVEMEERNV FGAMTFVSRG EELLKRTRKG
301: DLHWKQVSFN INSNWQVVLK MKSKHVGGTF TKTKKCVVNG VCRDIPEWAH RGRADKMVER RAYFGVKTVE RVIEFECGNK REKQMWIEGI QQLLNSLEIG
401: SSVQWKH

Arabidopsis Description

phosphoinositide binding [Source:TAIR;Acc:AT4G32780]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.