Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G63300.1 | KRH01512 | AT5G13300.1 | 19363154 |
| AT3G63300.1 | KRH45201 | AT5G13300.1 | 19363154 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67258 | Soybean | nucleus | 76.29 | 96.86 |
| KRH71381 | Soybean | nucleus | 80.21 | 80.87 |
| KRH32056 | Soybean | nucleus | 79.59 | 80.25 |
| VIT_07s0151g00290.t01 | Wine grape | nucleus | 68.25 | 69.25 |
| KRG91356 | Soybean | cytosol | 64.95 | 66.18 |
| KRH35470 | Soybean | nucleus | 64.54 | 65.76 |
| KRH69115 | Soybean | nucleus | 65.36 | 65.23 |
| KRH31661 | Soybean | nucleus | 64.74 | 65.01 |
| GSMUA_Achr5P02990_001 | Banana | nucleus | 60.82 | 64.98 |
| PGSC0003DMT400049811 | Potato | plastid | 63.71 | 63.98 |
| Solyc09g065590.2.1 | Tomato | plastid | 63.92 | 63.66 |
| Bra040444.1-P | Field mustard | plastid | 62.89 | 62.76 |
| CDX93914 | Canola | nucleus | 63.51 | 62.73 |
| CDY53717 | Canola | nucleus | 63.3 | 62.53 |
| AT3G63300.1 | Thale cress | plastid | 63.92 | 62.25 |
| GSMUA_Achr7P07730_001 | Banana | nucleus | 57.11 | 62.25 |
| GSMUA_Achr4P21170_001 | Banana | cytosol | 46.8 | 61.85 |
| GSMUA_AchrUn_... | Banana | nucleus | 57.53 | 61.45 |
| Zm00001d013705_P001 | Maize | cytosol, nucleus, peroxisome | 56.91 | 58.85 |
| TraesCS5A01G377600.1 | Wheat | nucleus | 55.46 | 58.61 |
| Zm00001d033283_P001 | Maize | cytosol | 56.7 | 58.26 |
| TraesCS5B01G381200.1 | Wheat | nucleus | 55.67 | 58.19 |
| KXG37970 | Sorghum | cytosol | 56.49 | 58.17 |
| TraesCS5D01G387600.1 | Wheat | nucleus | 55.46 | 58.1 |
| HORVU5Hr1G093460.2 | Barley | nucleus | 55.46 | 57.97 |
| Zm00001d030661_P001 | Maize | cytosol | 54.23 | 56.93 |
| TraesCS5D01G067900.2 | Wheat | nucleus | 55.05 | 56.81 |
| OQU79534 | Sorghum | cytosol, mitochondrion, nucleus | 57.11 | 56.76 |
| TraesCS5A01G056700.2 | Wheat | nucleus | 54.85 | 56.48 |
| TraesCS5B01G060100.2 | Wheat | nucleus | 54.43 | 56.29 |
| GSMUA_Achr4P21160_001 | Banana | cytosol | 11.13 | 55.67 |
| Os12t0604200-00 | Rice | nucleus | 42.47 | 55.53 |
| Os03t0635800-01 | Rice | nucleus | 42.06 | 53.97 |
| KRH62055 | Soybean | cytosol, extracellular, nucleus, plastid | 35.05 | 41.16 |
| KRH52723 | Soybean | cytosol, extracellular, nucleus, plastid | 34.02 | 39.01 |
| KRH28119 | Soybean | nucleus | 28.87 | 35.81 |
| KRH04152 | Soybean | nucleus | 28.87 | 35.62 |
| KRH77342 | Soybean | cytosol, endoplasmic reticulum, nucleus | 28.04 | 34.78 |
| KRH57434 | Soybean | nucleus | 28.04 | 34.52 |
| KRH02952 | Soybean | cytosol | 24.12 | 30.47 |
| KRH18946 | Soybean | nucleus | 24.12 | 30.23 |
Protein Annotations
| EMBL:ACUP02012119 | EnsemblPlants:KRG95576 | EnsemblPlantsGene:GLYMA_19G159200 | EntrezGene:100793202 | InterPro:DUF828 | InterPro:PH_pln |
| PANTHER:PTHR31351 | PANTHER:PTHR31351:SF8 | PFAM:PF05703 | PFAM:PF08458 | ProteinID:KRG95576 | ProteinID:KRG95576.1 |
| SEG:seg | UniParc:UPI000233EE9C | UniProt:I1N9K2 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr19:+:42004029..42008004
Molecular Weight (calculated)
51920.1 Da
IEP (calculated)
9.570
GRAVY (calculated)
-0.398
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPKCTINCR RPEFVPTPLP ESPRVPMEFL SRSWSASALE VSKALAPHSS YNNSSSIPEQ TSASAPNHNN NPFSEDLSTI SSKNQFSFAS SATSQLVLER
101: IMSQSAREEV SPLTSGRLSH SSEPLNGGGS LTGTDSPPIS PSDEFDDVVK FFRANNSIHP LFNGGRASAT IGNGTACSGP KTVGRWLKDR REKKKEENRT
201: HNAQLHATIS VAAVAAAVAA IAAATAGSSA PSKDEKMAKT DTAVASAATL VAAQCVEAAE AMGAERDHLA SVVSSAVNVR SHDDITTLTA AAATALRGAA
301: TLKARALKEV WNIATVTPLE RGIGGIGLCG KSINSNTSNT SNTSTSDSGE IFKGENFPGS CSQDLLAKGS ELLKRTRKGD LHWKIVSVYI HRTGQVMLKM
401: KSRHVAGTIT KKKKNVVLDI CADLPAWPGR HLLDDGEKRR YFGLKTDARG IVEFECRNQR EYDIWTQGVS RLLSVVAQRQ SRYGN
101: IMSQSAREEV SPLTSGRLSH SSEPLNGGGS LTGTDSPPIS PSDEFDDVVK FFRANNSIHP LFNGGRASAT IGNGTACSGP KTVGRWLKDR REKKKEENRT
201: HNAQLHATIS VAAVAAAVAA IAAATAGSSA PSKDEKMAKT DTAVASAATL VAAQCVEAAE AMGAERDHLA SVVSSAVNVR SHDDITTLTA AAATALRGAA
301: TLKARALKEV WNIATVTPLE RGIGGIGLCG KSINSNTSNT SNTSTSDSGE IFKGENFPGS CSQDLLAKGS ELLKRTRKGD LHWKIVSVYI HRTGQVMLKM
401: KSRHVAGTIT KKKKNVVLDI CADLPAWPGR HLLDDGEKRR YFGLKTDARG IVEFECRNQR EYDIWTQGVS RLLSVVAQRQ SRYGN
001: MERELRRPNP INSSRRPEIF SSGGSSTQLP ESPRGPMEFL SRSWSVSALE VSRALHTAKS ASATNRPPSS INTPIPEETL NPEKEECPPE NSTSVSSQFS
101: FAASATSQLV LERIMSQSEV SPLTSGRLSH SSGPLNGGGS FTETDSPPIS PSDEFDDVIK YFRTHNTIHP LFSGTGGSRG TTGNGSNTPM AGTGPKTVGR
201: WLKDRKEKKK EETRTQNAQV HAAVSVAAVA SAVAAVAAAT AASSPGKNEQ MARIDMAMAS AAALVAAQCV EAAEIMGADR DHLTSVVSSA VNVKSHDDIV
301: TLTAAAATAL RGAATLKARA LKEVWNIAAV LPAEKGASSA LCGQVDTKHS DSSFSGELPV AGEDFLGVCN QELLAKGTEL LKRTRGGELH WKIVSVYINK
401: AGQAVLKMKS KHVGGTFTKK KKHMVLEVRK DIPAWAGRDL FNGDKHHYFG LKTETKRVIE FECRNQREYE IWTQGVSRLL AIAAEKKQKS SMSKWMAP
101: FAASATSQLV LERIMSQSEV SPLTSGRLSH SSGPLNGGGS FTETDSPPIS PSDEFDDVIK YFRTHNTIHP LFSGTGGSRG TTGNGSNTPM AGTGPKTVGR
201: WLKDRKEKKK EETRTQNAQV HAAVSVAAVA SAVAAVAAAT AASSPGKNEQ MARIDMAMAS AAALVAAQCV EAAEIMGADR DHLTSVVSSA VNVKSHDDIV
301: TLTAAAATAL RGAATLKARA LKEVWNIAAV LPAEKGASSA LCGQVDTKHS DSSFSGELPV AGEDFLGVCN QELLAKGTEL LKRTRGGELH WKIVSVYINK
401: AGQAVLKMKS KHVGGTFTKK KKHMVLEVRK DIPAWAGRDL FNGDKHHYFG LKTETKRVIE FECRNQREYE IWTQGVSRLL AIAAEKKQKS SMSKWMAP
Arabidopsis Description
VABVAN3-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q8W4K5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.