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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • mitochondrion 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr4P00060_001
GSMUA_Achr7P22530_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G63300.1 GSMUA_Achr11P... AT5G13300.1 19363154
AT3G63300.1 GSMUA_Achr4P00060_001 AT5G13300.1 19363154
AT3G63300.1 GSMUA_Achr7P22530_001 AT5G13300.1 19363154
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36869 Canola nucleus, plastid 53.61 29.89
GSMUA_Achr5P02990_001 Banana nucleus 77.32 16.52
GSMUA_Achr7P07730_001 Banana nucleus 75.26 16.4
GSMUA_AchrUn_... Banana nucleus 71.13 15.2
TraesCS5B01G060100.2 Wheat nucleus 69.07 14.29
TraesCS5D01G067900.2 Wheat nucleus 69.07 14.26
TraesCS5A01G056700.2 Wheat nucleus 69.07 14.23
KRH67258 Soybean nucleus 55.67 14.14
Zm00001d013705_P001 Maize cytosol, nucleus, peroxisome 65.98 13.65
Zm00001d030661_P001 Maize cytosol 62.89 13.2
KXG37970 Sorghum cytosol 63.92 13.16
OQU79534 Sorghum cytosol, mitochondrion, nucleus 65.98 13.11
TraesCS5A01G377600.1 Wheat nucleus 61.86 13.07
AT5G43870.1 Thale cress plastid 60.82 13.02
VIT_05s0020g04020.t01 Wine grape nucleus 61.86 13.02
TraesCS5D01G387600.1 Wheat nucleus 61.86 12.96
TraesCS5B01G381200.1 Wheat nucleus 61.86 12.93
HORVU5Hr1G093460.2 Barley nucleus 61.86 12.93
Zm00001d033283_P001 Maize cytosol 62.89 12.92
Bra033702.1-P Field mustard cytosol, plastid 55.67 12.71
CDY14898 Canola cytosol 58.76 12.64
VIT_07s0151g00290.t01 Wine grape nucleus 61.86 12.55
Bra036001.1-P Field mustard nucleus 57.73 12.42
KRG91356 Soybean cytosol 60.82 12.39
KRH35470 Soybean nucleus 60.82 12.39
CDX94730 Canola cytosol 56.7 12.25
PGSC0003DMT400049811 Potato plastid 60.82 12.22
Solyc09g065590.2.1 Tomato plastid 60.82 12.12
KRH31661 Soybean nucleus 59.79 12.01
CDY22328 Canola plastid 55.67 11.97
KRH69115 Soybean nucleus 59.79 11.93
Solyc09g082580.2.1 Tomato cytosol 56.7 11.83
PGSC0003DMT400016521 Potato nucleus 56.7 11.8
CDY29764 Canola nucleus 53.61 11.74
CDX96925 Canola plastid 58.76 11.63
CDY50683 Canola cytosol, endoplasmic reticulum, nucleus 54.64 11.4
Bra039719.1-P Field mustard nucleus 54.64 11.4
Bra040444.1-P Field mustard plastid 56.7 11.32
CDY53717 Canola nucleus 56.7 11.2
KRG95576 Soybean nucleus 55.67 11.13
Bra036892.1-P Field mustard nucleus 53.61 11.11
Bra023803.1-P Field mustard cytosol 51.55 10.87
AT3G63300.1 Thale cress plastid 55.67 10.84
KRH71381 Soybean nucleus 53.61 10.81
KRH32056 Soybean nucleus 53.61 10.81
CDX93914 Canola nucleus 54.64 10.79
AT4G14740.1 Thale cress cytosol, endoplasmic reticulum, nucleus 52.58 10.74
AT3G22810.1 Thale cress cytosol 51.55 10.59
GSMUA_Achr8P11040_001 Banana cytosol 36.08 10.45
CDY46598 Canola mitochondrion 51.55 10.35
GSMUA_Achr10P... Banana nucleus 36.08 8.71
GSMUA_Achr11P... Banana nucleus 35.05 8.59
Os12t0604200-00 Rice nucleus 24.74 6.47
GSMUA_Achr10P... Banana cytosol 13.4 3.37
GSMUA_Achr4P02070_001 Banana cytosol 13.4 3.35
CDY16256 Canola cytosol 7.22 1.75
CDY36868 Canola nucleus 2.06 0.87
GSMUA_Achr4P21170_001 Banana cytosol 2.06 0.54
Os03t0635800-01 Rice nucleus 1.03 0.26
Protein Annotations
EnsemblPlants:GSMUA_Achr4P21160_001EnsemblPlants:GSMUA_Achr4T21160_001EnsemblPlantsGene:GSMUA_Achr4G21160_001InterPro:PH_plnPANTHER:PTHR31351PANTHER:PTHR31351:SF4
PFAM:PF08458SEG:segUniParc:UPI0002960487UniProt:M0SQS9MapMan:35.1:
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G21160_001]
Coordinates
chr4:-:21669099..21669967
Molecular Weight (calculated)
11535.0 Da
IEP (calculated)
11.152
GRAVY (calculated)
-1.071
Length
97 amino acids
Sequence
(BLAST)
1: MLKTKSKHVA GTITKKKKSV IVEVCKDIQA WPGRHLLEGG ERRRYFGLRT AEQRVIEFEC RSRREHDMWT QGVSRLLNIV NEKKKQQQQQ HHHPHRA
Best Arabidopsis Sequence Match ( AT5G43870.1 )
(BLAST)
001: MDQKSKTIGE QWWRSNPTFK PPETPLDSME FLSRTWSASA TEVSRAVVAS PPTSQPPQMR FSEIQNGSSD VTLVPEDEEN GIVLGNTFSF ASSETSLMVM
101: ERIMAQSPEI SSPRTSGRLS HSSFTDSPPI SPSDIDDFKQ FYRVSPSFNG HIRGSSAIPG TAGGSKTVGR WLKDRREKKR EETRAQNAQL HAAVSVAGVA
201: AAVAAIAAAT ASQSSSGTDE QVAKNDSAVA SAATLVAAKC VEAAEIMGAD REHLASVVSS AVNVRSAGDI MTLTAAAATA LRGAAQLKAR ALKEVWNIAA
301: VIPVDKGTPK GGGGGYRGGE LAPVDNFLGI CSKELLAKGC ELLKRTRKGD LHWKVVSIYI NRTKQVILKT KSKHVAGTIT KKKKNVVVGL VKGLPAWPGR
401: EMLEGGENLR YFGLKTVEKR VIEFECKSQR EYDLWTQGVS MLLSIASDRK HKC
Arabidopsis Description
At5g43870 [Source:UniProtKB/TrEMBL;Acc:Q9LKC2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.