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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr4P00060_001
GSMUA_Achr7P22530_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G63300.1 GSMUA_Achr11P... AT5G13300.1 19363154
AT3G63300.1 GSMUA_Achr4P00060_001 AT5G13300.1 19363154
AT3G63300.1 GSMUA_Achr7P22530_001 AT5G13300.1 19363154
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr7P07730_001 Banana nucleus 83.48 85.17
GSMUA_Achr5P02990_001 Banana nucleus 81.5 81.5
GSMUA_Achr4P21170_001 Banana cytosol 62.33 77.11
GSMUA_Achr4P21160_001 Banana cytosol 15.2 71.13
TraesCS5A01G377600.1 Wheat nucleus 70.48 69.72
HORVU5Hr1G093460.2 Barley nucleus 71.15 69.61
TraesCS5B01G381200.1 Wheat nucleus 70.93 69.4
TraesCS5D01G387600.1 Wheat nucleus 70.7 69.33
KXG37970 Sorghum cytosol 71.15 68.58
Zm00001d033283_P001 Maize cytosol 70.48 67.8
Zm00001d013705_P001 Maize cytosol, nucleus, peroxisome 69.16 66.95
VIT_05s0020g04020.t01 Wine grape nucleus 67.62 66.59
OQU79534 Sorghum cytosol, mitochondrion, nucleus 70.7 65.78
KRG91356 Soybean cytosol 68.5 65.34
Solyc09g082580.2.1 Tomato cytosol 66.52 64.95
Zm00001d030661_P001 Maize cytosol 65.86 64.72
PGSC0003DMT400016521 Potato nucleus 66.3 64.59
TraesCS5A01G056700.2 Wheat nucleus 66.96 64.54
TraesCS5B01G060100.2 Wheat nucleus 66.52 64.39
Os03t0635800-01 Rice nucleus 53.52 64.29
TraesCS5D01G067900.2 Wheat nucleus 66.52 64.26
KRH35470 Soybean nucleus 67.18 64.08
CDY50683 Canola cytosol, endoplasmic reticulum, nucleus 64.32 62.8
Bra036892.1-P Field mustard nucleus 64.54 62.61
Bra039719.1-P Field mustard nucleus 63.88 62.37
CDY16256 Canola cytosol 54.63 62.0
KRH69115 Soybean nucleus 66.3 61.93
KRH31661 Soybean nucleus 65.86 61.9
VIT_07s0151g00290.t01 Wine grape nucleus 64.98 61.72
AT4G14740.1 Thale cress cytosol, endoplasmic reticulum, nucleus 64.54 61.68
KRH67258 Soybean nucleus 51.76 61.52
Os12t0604200-00 Rice nucleus 50.0 61.19
CDY29764 Canola nucleus 59.69 61.17
Bra033702.1-P Field mustard cytosol, plastid 57.05 60.94
AT3G22810.1 Thale cress cytosol 63.22 60.81
CDY36869 Canola nucleus, plastid 23.13 60.34
AT5G43870.1 Thale cress plastid 59.47 59.6
CDX94730 Canola cytosol 58.37 59.02
CDY22328 Canola plastid 58.59 58.98
CDY14898 Canola cytosol 58.37 58.76
Bra036001.1-P Field mustard nucleus 58.15 58.54
KRH32056 Soybean nucleus 61.89 58.42
Bra023803.1-P Field mustard cytosol 59.03 58.26
PGSC0003DMT400049811 Potato plastid 61.89 58.18
Solyc09g065590.2.1 Tomato plastid 62.11 57.91
CDY36868 Canola nucleus 29.3 57.83
KRH71381 Soybean nucleus 61.23 57.8
KRG95576 Soybean nucleus 61.45 57.53
AT3G63300.1 Thale cress plastid 62.33 56.83
CDX93914 Canola nucleus 61.23 56.62
Bra040444.1-P Field mustard plastid 60.13 56.17
CDY53717 Canola nucleus 60.57 56.01
CDY46598 Canola mitochondrion 59.25 55.69
CDX96925 Canola plastid 57.93 53.67
GSMUA_Achr8P11040_001 Banana cytosol 32.82 44.48
GSMUA_Achr10P... Banana nucleus 36.78 41.54
GSMUA_Achr11P... Banana nucleus 33.7 38.64
GSMUA_Achr4P02070_001 Banana cytosol 23.79 27.84
GSMUA_Achr10P... Banana cytosol 22.69 26.68
Protein Annotations
EnsemblPlants:GSMUA_AchrUn_randomP22720_001EnsemblPlants:GSMUA_AchrUn_randomT22720_001EnsemblPlantsGene:GSMUA_AchrUn_randomG22720_001InterPro:DUF828InterPro:PH_plnPANTHER:PTHR31351
PANTHER:PTHR31351:SF4PFAM:PF05703PFAM:PF08458SEG:segTMHMM:TMhelixUniParc:UPI00029584A8
UniProt:M0UBI0MapMan:35.1::::
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG22720_001]
Coordinates
chrchrUn_random:-:111368007..111371405
Molecular Weight (calculated)
49203.8 Da
IEP (calculated)
9.841
GRAVY (calculated)
-0.413
Length
454 amino acids
Sequence
(BLAST)
001: MEDNREQWRA EAPTHGLRPP EVPKDPMEFL SRSWSASALE VSKALAPPPP PPLLPAPSGA IPEEELEEAV VVAGNPFSFA SSATTQMVME RIMSQPEVSP
101: LTSGRPSHSS GPLNGGGSLS DSPPVSPCEM DNLKYCRATN TPKPQHCRGS SKTVGRWLKD RRERKKEETR AQNAQLHAAV SVAGVAAAVA AVAAATAAAS
201: GSGKDDRAAR VDMVVASAAT LVAAQCVEAA ESMGAEREHL ASVVESAVSV RTPGDIVTLT AAAATALRGA ATLKARALKD VWNIAAVIPV EKGAMGNHKN
301: HHRSKQLKEL DSKGSSFSDE FAPEEDNFLG LCSQEFLAKG TELLKRTRKG ALHWKIVSVY INRMGQVMLK MKSRHVGGTI TKKKKSVVIE VCKEVQAWPG
401: RHLVEGGERR RYFGLRTAEH RVIEFECRGR REYEMWTQGV ARLLNIVKER KHHS
Best Arabidopsis Sequence Match ( AT3G22810.1 )
(BLAST)
001: MEKPVFAPWR SDQVFRPPET PLEPMEFLSR SWSVSAHEVS KALTPSQQLL SKASIENTTV ILEEPIAAGE TETEDNSFVS GNPFSFACSE TSQMVMDRIL
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KNVVIDVIKN VQAWPGRHLL EGGEDLRYFG LKTVPRGIVE FQCKSQREYE MWTQGVSRLI AVAAERNNRY RI
Arabidopsis Description
Auxin canalization protein (DUF828) [Source:UniProtKB/TrEMBL;Acc:Q9LUI0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.