CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
peroxisome 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31661	Soybean	nucleus	95.06	95.65
KRH35470	Soybean	nucleus	79.42	81.09
KRG91356	Soybean	cytosol	79.22	80.88
VIT_05s0020g04020.t01	Wine grape	nucleus	75.93	80.04
PGSC0003DMT400016521	Potato	nucleus	74.28	77.47
Solyc09g082580.2.1	Tomato	cytosol	74.07	77.42
CDY36869	Canola	nucleus, plastid	26.13	72.99
CDY50683	Canola	cytosol, endoplasmic reticulum, nucleus	69.55	72.69
Bra036892.1-P	Field mustard	nucleus	69.96	72.65
Bra039719.1-P	Field mustard	nucleus	69.34	72.47
CDY29764	Canola	nucleus	65.43	71.78
KRH67258	Soybean	nucleus	56.17	71.47
AT4G14740.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	69.75	71.37
CDY16256	Canola	cytosol	57.82	70.25
AT3G22810.1	Thale cress	cytosol	68.11	70.13
GSMUA_Achr5P02990_001	Banana	nucleus	64.2	68.72
Bra033702.1-P	Field mustard	cytosol, plastid	59.67	68.24
Bra023803.1-P	Field mustard	cytosol	62.96	66.52
GSMUA_AchrUn_...	Banana	nucleus	61.93	66.3
CDY22328	Canola	plastid	61.32	66.08
GSMUA_Achr7P07730_001	Banana	nucleus	60.49	66.07
GSMUA_Achr4P21170_001	Banana	cytosol	49.59	65.67
AT5G43870.1	Thale cress	plastid	61.11	65.56
CDX94730	Canola	cytosol	60.49	65.48
KRG95576	Soybean	nucleus	65.23	65.36
KRH32056	Soybean	nucleus	64.61	65.28
KRH71381	Soybean	nucleus	63.99	64.66
HORVU5Hr1G093460.2	Barley	nucleus	61.52	64.44
CDY14898	Canola	cytosol	59.67	64.3
TraesCS5A01G377600.1	Wheat	nucleus	60.7	64.27
TraesCS5D01G387600.1	Wheat	nucleus	61.11	64.15
KXG37970	Sorghum	cytosol	62.14	64.12
Bra036001.1-P	Field mustard	nucleus	59.47	64.08
TraesCS5B01G381200.1	Wheat	nucleus	61.11	64.01
Zm00001d013705_P001	Maize	cytosol, nucleus, peroxisome	61.11	63.33
CDY46598	Canola	mitochondrion	62.76	63.15
Zm00001d033283_P001	Maize	cytosol	61.32	63.14
CDY36868	Canola	nucleus	29.84	63.04
TraesCS5A01G056700.2	Wheat	nucleus	60.49	62.42
TraesCS5D01G067900.2	Wheat	nucleus	60.29	62.34
TraesCS5B01G060100.2	Wheat	nucleus	59.88	62.05
OQU79534	Sorghum	cytosol, mitochondrion, nucleus	61.11	60.86
Zm00001d030661_P001	Maize	cytosol	57.2	60.17
GSMUA_Achr4P21160_001	Banana	cytosol	11.93	59.79
Os03t0635800-01	Rice	nucleus	46.3	59.52
CDX96925	Canola	plastid	59.47	58.98
Os12t0604200-00	Rice	nucleus	44.44	58.22
KRH62055	Soybean	cytosol, extracellular, nucleus, plastid	35.39	41.65
KRH52723	Soybean	cytosol, extracellular, nucleus, plastid	34.57	39.72
KRH28119	Soybean	nucleus	29.63	36.83
KRH77342	Soybean	cytosol, endoplasmic reticulum, nucleus	28.81	35.81
KRH04152	Soybean	nucleus	28.19	34.86
KRH57434	Soybean	nucleus	27.98	34.52
KRH02952	Soybean	cytosol	25.51	32.29
KRH18946	Soybean	nucleus	25.31	31.78

Protein Annotations

EMBL:ACUP02000689	EnsemblPlants:KRH69115	EnsemblPlantsGene:GLYMA_02G005100	EntrezGene:100793882	InterPro:DUF828	InterPro:PH_pln
PANTHER:PTHR31351	PANTHER:PTHR31351:SF16	PFAM:PF05703	PFAM:PF08458	ProteinID:KRH69115	ProteinID:KRH69115.1
SEG:seg	UniParc:UPI000233706C	UniProt:I1JB80	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr2:+:564204..569464

Molecular Weight (calculated)

51952.4 Da

IEP (calculated)

9.806

GRAVY (calculated)

-0.396

Length

486 amino acids

Sequence
(BLAST)

001: MEKERPARRP DPFHARPPPP PSETPRDPME FLSRSWSASA LEVSKALASQ QQLPPSSNNV SIVCYNNNSN ASIILEDIAG EVEESAATVS GNPFSFASSE
101: TSQMIMDRIM SHSQEVSPRT SGRLSHSSGP LNGSLTDSPP VSPSEIDDFK YNRSNNNHNT VNMITGLNGQ YWGAGGAATT AGGGKTVGRW LKDRKEKKKE
201: ETRAHNAQLH AAVSVAGVAA AMAAIAAATA ASSGSRKDEQ MAKTDMAVAS AATLVAAQCV EAAEAMGAER DHLASVVSSA VNVRSAGDIT TLTAAAATAL
301: RGAATLKARV LKEVWNIAAV IPVEKNLGGG SGGGDNGNGS NGSSNSSFSG EIVPEENFLG ICSRELLARG CELLKRTRTG ELHWKIVSVY INRMNQVMVK
401: MKSRHVAGTI TKKKKNVVLG VIKDMPAWPG RHLLEGGENR RYFGLKTVMR GVVEFECRNQ REYDVWTQGV SRLLSIAAER NNRNRI

Best Arabidopsis Sequence Match ( AT3G22810.1 )
(BLAST)

001: MEKPVFAPWR SDQVFRPPET PLEPMEFLSR SWSVSAHEVS KALTPSQQLL SKASIENTTV ILEEPIAAGE TETEDNSFVS GNPFSFACSE TSQMVMDRIL
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KNVVIDVIKN VQAWPGRHLL EGGEDLRYFG LKTVPRGIVE FQCKSQREYE MWTQGVSRLI AVAAERNNRY RI

Arabidopsis Description

Auxin canalization protein (DUF828) [Source:UniProtKB/TrEMBL;Acc:Q9LUI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.