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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, nucleus, plastid
iPSORT:plastid
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G163000.1 Wheat cytosol 88.06 96.5
TraesCS3A01G155500.1 Wheat cytosol 86.78 94.21
OQU86061 Sorghum cytosol 68.44 75.18
Os01t0231600-00 Rice cytosol 14.29 73.63
Zm00001d039295_P001 Maize cytosol 64.39 73.48
GSMUA_Achr10P... Banana nucleus 47.97 55.97
HORVU3Hr1G031590.6 Barley cytosol, nucleus, plastid 78.89 54.33
VIT_04s0008g03570.t01 Wine grape cytosol, nucleus, plastid 44.56 49.29
KRH62055 Soybean cytosol, extracellular, nucleus, plastid 41.15 46.73
Solyc08g066860.2.1 Tomato nucleus 41.15 46.51
PGSC0003DMT400024848 Potato cytosol 41.15 46.51
KRH52723 Soybean cytosol, extracellular, nucleus, plastid 41.36 45.86
CDX75286 Canola cytosol 38.17 41.92
Bra011382.1-P Field mustard cytosol 38.17 41.92
CDX68890 Canola cytosol 37.95 41.69
AT4G32780.2 Thale cress cytosol 37.31 41.08
TraesCS1B01G234200.1 Wheat cytosol, endoplasmic reticulum, nucleus 28.14 34.38
TraesCS6B01G275000.1 Wheat cytosol 28.14 34.2
TraesCS5B01G381200.1 Wheat nucleus 33.48 33.84
TraesCS4B01G373700.1 Wheat nucleus 29.0 33.83
TraesCS5B01G060100.2 Wheat nucleus 33.26 33.26
TraesCS2B01G372200.1 Wheat cytosol 21.32 23.75
Protein Annotations
EnsemblPlants:TraesCS3B01G182000.2EnsemblPlantsGene:TraesCS3B01G182000InterPro:DUF828InterPro:IPR001849InterPro:PH_domainInterPro:PH_pln
ncoils:CoilPANTHER:PTHR31351PANTHER:PTHR31351:SF7PFAM:PF05703PFAM:PF08458SEG:seg
SMART:SM00233SUPFAM:SSF50729TMHMM:TMhelixMapMan:35.1::
Description
No Description!
Coordinates
chr3B:+:190907269..190912050
Molecular Weight (calculated)
49853.7 Da
IEP (calculated)
10.441
GRAVY (calculated)
-0.328
Length
469 amino acids
Sequence
(BLAST)
001: MESSIFIVQK RRRRGRGTRT FCQVYASPLR NQAMEECLDQ QQQQQKKSNN GQLQRLEGIE EEGGQAPAEK WPPTTVRAPE TPTETMEFLA RSWSLSAAEI
101: SKALKVLSSK GVCDIPDVGV VAGAGKEQRP PPPPPLDATM AAAQAGGGVA SPPFSPRAGN MDAQLLRAAA AAGRAGGGKT TMGAWIKEQK EKKRAEARSR
201: NAQAYAATSV AGVAAAVAAL VAGAVFSSSP APPPPPPAAA APERAQRGDG GAKTAAAIAS AAALVASHCV EMAQAMGASH EQILGSIQSA VNAQSSGDIM
301: ALTAGAATAL RGAAMLRARL HKEIQATALP GDAGRAASER DISPLIFVSR GGELLKRTRQ GILHWKLVTA YIDPNFQVVI KMKSAHMAGT FIKTKKCVVV
401: DVRSEVAAWA GREVEEGGRR RGYFGVRTEE RVIEFECRSR QEQHKWVQGI TEMLNRRDNM NMNITHLVN
Best Arabidopsis Sequence Match ( AT4G32780.2 )
(BLAST)
001: MTSLHKTLFT QNPTTLDQLM MCHTGRDNSW KKLENIDEEG PSTVAREVRT ALPPETPTEM MEFLGRSWSI SAVELTRAFF NNSTADTNSF LLSTIVNTNK
101: EDREDEEDST SMASSRDLLL PHVGNKTSPP ITPRTGREMK HLYKSMIRGR TMGRRLKDQK EKKKQETRTR NAEIHAAVSV AGVAAVVAAT AASNAIAAAE
201: DAVESTTVAA AMASAAALIA SHCIEIAGEI GAGYNQIATA VSSATNARTN GDIMALTASA ATALRGAAIL RSRMERNNEN KAMLYATKEH VVEMEERNVF
301: GAMTFVSRGE ELLKRTRKGD LHWKQVSFNI NSNWQVVLKM KSKHVGGTFT KTKKCVVNGV CRDIPEWAHR GRADKMVERR AYFGVKTVER VIEFECGNKR
401: EKQMWIEGIQ QLLNSLEIGS SVQWKH
Arabidopsis Description
phosphoinositide binding [Source:TAIR;Acc:AT4G32780]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.