Factsheet for Zm00001d039295_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU86061	Sorghum	cytosol	90.27	86.89
Os01t0231600-00	Rice	cytosol	15.57	70.33
TraesCS3A01G155500.1	Wheat	cytosol	73.24	69.68
TraesCS3D01G163000.1	Wheat	cytosol	72.02	69.16
TraesCS3B01G182000.2	Wheat	mitochondrion	73.48	64.39
GSMUA_Achr10P...	Banana	nucleus	54.5	55.72
VIT_04s0008g03570.t01	Wine grape	cytosol, nucleus, plastid	49.15	47.64
Solyc08g066860.2.1	Tomato	nucleus	46.47	46.02
PGSC0003DMT400024848	Potato	cytosol	46.47	46.02
KRH62055	Soybean	cytosol, extracellular, nucleus, plastid	45.01	44.79
Bra011382.1-P	Field mustard	cytosol	45.74	44.03
CDX75286	Canola	cytosol	45.74	44.03
CDX68890	Canola	cytosol	45.74	44.03
KRH52723	Soybean	cytosol, extracellular, nucleus, plastid	44.77	43.5
AT4G32780.2	Thale cress	cytosol	43.8	42.25
HORVU3Hr1G031590.6	Barley	cytosol, nucleus, plastid	67.88	40.97
Zm00001d030661_P001	Maize	cytosol	38.93	34.63
Zm00001d000175_P001	Maize	plastid	32.85	34.01
Zm00001d033283_P001	Maize	cytosol	38.44	33.47
Zm00001d013705_P001	Maize	cytosol, nucleus, peroxisome	37.71	33.05
Zm00001d029886_P001	Maize	vacuole	31.14	32.32
Zm00001d051361_P001	Maize	plastid	31.39	30.07
Zm00001d003160_P001	Maize	cytosol	22.87	23.27
Zm00001d025771_P001	Maize	cytosol	21.65	20.84

Protein Annotations

EnsemblPlants:Zm00001d039295_P001	EnsemblPlants:Zm00001d039295_T001	EnsemblPlantsGene:Zm00001d039295	EntrezGene:103649544	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:DUF828	InterPro:PH_pln	ncoils:Coil	PANTHER:PTHR31351	PANTHER:PTHR31351:SF7
PFAM:PF05703	PFAM:PF08458	ProteinID:ONM28229.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000221296C
UniProt:A0A1D6MF20	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3:-:1201798..1203788

Molecular Weight (calculated)

43009.4 Da

IEP (calculated)

10.043

GRAVY (calculated)

-0.173

Length

411 amino acids

Sequence
(BLAST)

001: MEQCADDHGG QVPRLEGIEE EGSPADKWAP TTVRPPETPT ETMEFLARSW SLSAAEISKA LRALSCGNAA SDSPPAVVAT STAERPPLGS DHRRLSLPQK
101: ADAAAGAGGE AGGGTSQPIS PRVHLGDVKL LRAAGRGKTV GAWIKEQREK KRAEARSRNA QAYAATSVAG VAAAVAALVA GAVFSSSSAA PEQRPAKGDG
201: GGAKTAAAVA SAAALVASHC VEMAQAIGAS HDQILAAIHS AVNAQSSGDV MALTAGAATA LRGAAMLRAR LHKEIQATAL PGDGREPERD ISPLVFVSRG
301: GELLKRTRQG ALHWKLVTVY INSGFEVVLK MQSAHMAGTF IKTKKCVVLD VCSEIPAWAG REVGRRGYLG IRTVERVIEF EVRSRREQRK WVQGITGMLL
401: RRDSINNAAC L

Best Arabidopsis Sequence Match ( AT4G32780.2 )
(BLAST)

001: MTSLHKTLFT QNPTTLDQLM MCHTGRDNSW KKLENIDEEG PSTVAREVRT ALPPETPTEM MEFLGRSWSI SAVELTRAFF NNSTADTNSF LLSTIVNTNK
101: EDREDEEDST SMASSRDLLL PHVGNKTSPP ITPRTGREMK HLYKSMIRGR TMGRRLKDQK EKKKQETRTR NAEIHAAVSV AGVAAVVAAT AASNAIAAAE
201: DAVESTTVAA AMASAAALIA SHCIEIAGEI GAGYNQIATA VSSATNARTN GDIMALTASA ATALRGAAIL RSRMERNNEN KAMLYATKEH VVEMEERNVF
301: GAMTFVSRGE ELLKRTRKGD LHWKQVSFNI NSNWQVVLKM KSKHVGGTFT KTKKCVVNGV CRDIPEWAHR GRADKMVERR AYFGVKTVER VIEFECGNKR
401: EKQMWIEGIQ QLLNSLEIGS SVQWKH

Arabidopsis Description

phosphoinositide binding [Source:TAIR;Acc:AT4G32780]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.