Factsheet for Zm00001d009353_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004245_P003
Zm00001d009353_P001
Zm00001d009504_P002
Zm00001d013705_P001
Zm00001d013996_P003
Zm00001d015278_P001
Zm00001d015981_P001
Zm00001d021087_P003
Zm00001d023982_P001
Zm00001d030661_P001
Zm00001d031667_P006
Zm00001d033283_P001
Zm00001d038955_P001
Zm00001d039404_P001
Zm00001d045530_P001
Zm00001d049871_P001
Zm00001d049872_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13300.1	Zm00001d013705_P001	AT3G63300.1	19363154
AT5G13300.1	Zm00001d030661_P001	AT3G63300.1	19363154
AT5G13300.1	Zm00001d033283_P001	AT3G63300.1	19363154
AT5G13300.1	Zm00001d004245_P003	AT5G13300.1	15743878
AT5G13300.1	Zm00001d009353_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d015278_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d015981_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d021087_P003	AT5G13300.1	15743878
AT5G13300.1	Zm00001d023982_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d031667_P006	AT5G13300.1	15743878
AT5G13300.1	Zm00001d049871_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d049872_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d013996_P003	AT5G26980.1	15743878
AT5G13300.1	Zm00001d039404_P001	AT5G26980.1	15743878
AT5G13300.1	Zm00001d045530_P001	AT5G26980.1	15743878
AT5G13300.1	Zm00001d009504_P002	AT5G42080.1	15923323
AT5G13300.1	Zm00001d038955_P001	AT5G42080.1	15923323

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015981_P001	Maize	peroxisome	86.78	68.63
Zm00001d004245_P003	Maize	cytosol	91.74	57.81
Zm00001d023982_P001	Maize	cytosol	91.74	28.53
Zm00001d015278_P001	Maize	mitochondrion	63.64	22.92
Zm00001d049872_P001	Maize	cytosol	93.39	20.58
Zm00001d031667_P006	Maize	cytosol	90.91	13.37
OQU80812	Sorghum	cytosol	90.08	13.23
Solyc12g042170.1.1	Tomato	cytosol	53.72	11.99
Zm00001d032879_P001	Maize	extracellular	21.49	11.98
TraesCS7A01G263800.2	Wheat	cytosol	79.34	11.66
HORVU7Hr1G055220.21	Barley	cytosol	79.34	11.55
Os08t0537600-01	Rice	plasma membrane	79.34	11.55
TraesCS7D01G264700.1	Wheat	endoplasmic reticulum	79.34	11.33
TraesCS7B01G161800.1	Wheat	endoplasmic reticulum	79.34	11.33
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	66.94	10.95
Zm00001d021087_P003	Maize	cytosol	74.38	10.75
PGSC0003DMT400036762	Potato	cytosol	49.59	10.27
GSMUA_Achr11P...	Banana	cytosol	67.77	10.05
GSMUA_Achr4P00060_001	Banana	cytosol	66.94	9.68
CDX86943	Canola	cytosol	55.37	9.41
CDX70496	Canola	cytosol	42.15	9.22
PGSC0003DMT400005756	Potato	cytosol	61.98	9.18
Solyc05g023750.2.1	Tomato	cytosol	61.16	9.06
AT5G13300.1	Thale cress	cytosol	61.16	8.95
VIT_01s0150g00030.t01	Wine grape	cytosol	61.16	8.89
KRH45201	Soybean	cytosol	60.33	8.87
Bra006193.1-P	Field mustard	cytosol	59.5	8.86
Bra010046.1-P	Field mustard	cytosol	57.85	8.85
Bra008838.1-P	Field mustard	cytosol	60.33	8.84
CDX69650	Canola	cytosol	60.33	8.84
KRH01512	Soybean	cytosol	61.16	8.82
CDX78515	Canola	cytosol	60.33	8.78
CDY00242	Canola	cytosol	57.02	8.77
KRH59741	Soybean	cytosol	56.2	8.5
VIT_17s0000g00310.t01	Wine grape	cytosol	57.85	8.46
AT5G61980.1	Thale cress	cytosol	57.85	8.45
KRH63858	Soybean	cytosol	53.72	8.28
CDY09784	Canola	cytosol	54.55	8.27
CDY30689	Canola	cytosol	58.68	8.24
Bra029295.1-P	Field mustard	cytosol	58.68	8.24
Zm00001d051187_P009	Maize	plastid	46.28	7.94
Zm00001d021802_P001	Maize	cytosol	29.75	7.52
Solyc03g118260.1.1	Tomato	cytosol	48.76	7.38
Zm00001d012827_P002	Maize	cytosol	25.62	7.36
Zm00001d007856_P001	Maize	cytosol	16.53	7.35
Zm00001d047020_P002	Maize	cytosol	26.45	7.27
Zm00001d006602_P001	Maize	cytosol	29.75	7.26
Zm00001d034885_P002	Maize	cytosol	24.79	7.21
CDY53619	Canola	cytosol	19.83	7.12
KRH54108	Soybean	cytosol	40.5	6.64
Zm00001d047793_P001	Maize	extracellular, plasma membrane	24.79	6.62
Zm00001d028656_P001	Maize	mitochondrion	24.79	6.61
Zm00001d030031_P002	Maize	plastid	25.62	6.42
Zm00001d051030_P001	Maize	cytosol, plastid	11.57	2.63
Zm00001d046873_P001	Maize	cytosol, plastid	11.57	2.63
Zm00001d016547_P001	Maize	cytosol, plastid	11.57	2.63
CDY08879	Canola	cytosol	1.65	0.63
Solyc12g042180.1.1	Tomato	cytosol	0.83	0.45
Zm00001d049871_P001	Maize	cytosol	0.0	0.0
Zm00001d031462_P001	Maize	endoplasmic reticulum, extracellular	0.0	0.0
Zm00001d016932_P001	Maize	endoplasmic reticulum	0.0	0.0
Zm00001d051188_P001	Maize	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.40.160	MapMan:35.1	UniProt:A0A1D6FJ31	ProteinID:AQK91768.1	ProteinID:AQK91769.1	InterPro:ARFGAP/RecO
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164	InterPro:IPR038508	PFAM:PF01412
PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF242	SMART:SM00105	SUPFAM:SSF57863
UniParc:UPI000843F385	EnsemblPlantsGene:Zm00001d009353	EnsemblPlants:Zm00001d009353_P001	EnsemblPlants:Zm00001d009353_T001	:	:

Description

Putative ARF GTPase activating domain protein with ankyrin repeat-containing protein

Coordinates

chr8:+:58247107..58248980

Molecular Weight (calculated)

13619.3 Da

IEP (calculated)

5.517

GRAVY (calculated)

-0.278

Length

121 amino acids

Sequence
(BLAST)

001: MSPVEFEPSV SEDLVLEKKY ENGQHDVRGT HHHRTSMKPE KPIDLLRKVD GDNMCADCGA SEPDWASLYL GALLCIECSE VHRNLGVHIS KVRSLTLDVR
101: VWEPSVINLF QSLGNMFVNS I

Best Arabidopsis Sequence Match ( AT5G13300.1 )
(BLAST)

001: MHFTKLDDSP MFRKQLQSME ESAEILRERS LKFYKGCRKY TEGLGEAYDG DIAFASALET FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC

Arabidopsis Description

AGD3ADP-ribosylation factor GTPase-activating protein AGD3 [Source:UniProtKB/Swiss-Prot;Acc:Q5W7F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.