Factsheet for Zm00001d047793_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

extracellular: 20408568
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028656_P001	Maize	mitochondrion	92.94	92.73
EER92462	Sorghum	mitochondrion	93.16	92.34
Zm00001d007856_P001	Maize	cytosol	54.3	90.44
Os03t0278400-01	Rice	plasma membrane	85.65	85.65
TraesCS4A01G099400.1	Wheat	mitochondrion	83.0	80.69
TraesCS4B01G204900.1	Wheat	mitochondrion	82.34	80.39
TraesCS4D01G205800.1	Wheat	mitochondrion	82.78	80.13
HORVU4Hr1G059060.2	Barley	mitochondrion	82.56	64.93
AT3G53710.2	Thale cress	cytosol	60.71	59.91
PGSC0003DMT400023046	Potato	mitochondrion	61.15	59.31
Solyc10g084690.1.1	Tomato	mitochondrion	60.04	59.26
Solyc09g010520.2.1	Tomato	nucleus	60.93	59.1
GSMUA_Achr10P...	Banana	mitochondrion	51.66	58.94
PGSC0003DMT400028571	Potato	mitochondrion	59.16	58.39
KRH67539	Soybean	mitochondrion	62.03	57.82
AT2G37550.1	Thale cress	mitochondrion	58.06	57.68
KRG95812	Soybean	endoplasmic reticulum	61.81	57.26
GSMUA_Achr7P10440_001	Banana	cytosol, plastid	49.01	56.06
KRH19707	Soybean	cytosol	59.38	55.93
KRH32302	Soybean	mitochondrion	58.94	55.74
CDY23645	Canola	cytosol	19.65	54.94
CDY16083	Canola	cytosol	26.71	51.27
VIT_00s0250g00050.t01	Wine grape	plastid	44.81	47.32
CDY26647	Canola	plastid	18.76	46.96
Bra026910.1-P	Field mustard	plastid	18.76	46.96
Zm00001d009353_P001	Maize	cytosol	6.62	24.79
Zm00001d034885_P002	Maize	cytosol	19.43	21.15
Zm00001d012827_P002	Maize	cytosol	19.21	20.67
Zm00001d015981_P001	Maize	peroxisome	6.84	20.26
Zm00001d004245_P003	Maize	cytosol	8.17	19.27
Zm00001d047020_P002	Maize	cytosol	18.1	18.64
Zm00001d021802_P001	Maize	cytosol	18.1	17.12
Zm00001d030031_P002	Maize	plastid	17.88	16.77
Zm00001d006602_P001	Maize	cytosol	16.78	15.32
Zm00001d016547_P001	Maize	cytosol, plastid	13.02	11.09
Zm00001d046873_P001	Maize	cytosol, plastid	13.02	11.09
Zm00001d051030_P001	Maize	cytosol, plastid	13.02	11.09
Zm00001d015278_P001	Maize	mitochondrion	7.28	9.82
Zm00001d049871_P001	Maize	cytosol	3.97	9.42
Zm00001d023982_P001	Maize	cytosol	6.84	7.97
Zm00001d021087_P003	Maize	cytosol	13.69	7.41
Zm00001d031667_P006	Maize	cytosol	13.24	7.29
Zm00001d049872_P001	Maize	cytosol	8.83	7.29
Zm00001d051188_P001	Maize	cytosol	1.99	6.82
Zm00001d051187_P009	Maize	plastid	9.71	6.24
Zm00001d016932_P001	Maize	endoplasmic reticulum	0.88	2.19
Zm00001d031462_P001	Maize	endoplasmic reticulum, extracellular	0.88	2.09
Zm00001d032879_P001	Maize	extracellular	0.88	1.84

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	UniProt:A0A1D6PDH1	ProteinID:AQL07619.1	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234
GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164	InterPro:IPR038508	PFAM:PF01412	PRINTS:PR00405
PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF35	SMART:SM00105	SUPFAM:SSF57863	UniParc:UPI000842DFED
EnsemblPlantsGene:Zm00001d047793	EnsemblPlants:Zm00001d047793_P001	EnsemblPlants:Zm00001d047793_T001	SEG:seg	:	:

Description

ADP-ribosylation factor GTPase-activating protein AGD7

Coordinates

chr9:+:141894232..141897109

Molecular Weight (calculated)

48735.6 Da

IEP (calculated)

7.992

GRAVY (calculated)

-0.883

Length

453 amino acids

Sequence
(BLAST)

001: MASTAARRLR ELQAQTGNKT CVDCAQRNPQ WASVSYGVFM CLECSGKHRG LGVHISFVRS VTMDSWTEAQ LRKMEAGGND RLNAFLTARG VPKETSHVAK
101: YNSNAAAAYR DRIAALAEGK PWTDPPVVKE TPGSGAPAPA RKPPLHASGG GGGWDDWDDD FRSDMRRNQS VGSFAAAGAQ SGRQPPRSKS TQDIYTRQQL
201: EASAANKDDF FARRMAENES KPEGIPPSQG GKYVGFGSSP APSANRNGGA AQGDVLQVVS QGFGRLSLVA ASAAQSAASV VQVGTKEIQS KMRDGGYDQK
301: VNETVSVVAN KTAEIGSKTW GIMRGVMAMA SQKVEEYAKE GGMSGWGEDW QRSEQNGEPY QRFEHATDSN SLNSSQNSSW KNNNSSSWDD WDDQGKKGEP
401: AKPHQSSDSW AGWDDGKDDG FDSPGYNNHN SSNKGSNHNG TSGGSFWREG GFR

Best Arabidopsis Sequence Match ( AT3G53710.1 )
(BLAST)

001: MAATRQLRTL QSQPENKVCV DCAQKNPQWA SVSYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSAIQIK KMEAGGNERL NKFFAQYGIA KETDIISKYN
101: SNAASVYRDR IQALAEGRPW NDPPVVKEAN KKPPLAQGGY GNNNNNNNGG WDSWDNDDSY KSDMRRNQSA NDFRASGNRE GAHVKSKSSE DIYTRSQLEA
201: SAAGKESFFA RRMAENESKP EGLPPSQGGK YVGFGSSSAP PPRNNQQDDV FSVVSQGFGR LSLVAASAAQ SAASVVQTGT KEFTSKVKEG GYDHKVSETV
301: NVVANKTTEI GHRTWGIMKG VMAMATQKVE EFTKEGSTSW NQQSENEGNG YYQNFGNGNK AANSSVGGGR PQSSSTSGHY NNSQNSNSWD SWGENENKKT
401: EAVAPKGSSA SNDDDGWTGW DDHDAKDDGF DGHYQSAGDK KSAGHNGKSD TAWTGGGFL

Arabidopsis Description

AGD6Probable ADP-ribosylation factor GTPase-activating protein AGD6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M354]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.