Factsheet for Zm00001d047020_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91883	Sorghum	cytosol	85.45	92.38
Os10t0574800-01	Rice	plasma membrane	77.5	83.78
TraesCS1A01G193000.1	Wheat	cytosol	76.14	82.72
TraesCS1D01G196700.1	Wheat	cytosol	75.91	82.47
Zm00001d030031_P002	Maize	plastid	85.91	78.26
TraesCS1B01G207900.1	Wheat	mitochondrion, plastid	76.14	71.13
GSMUA_Achr2P18150_001	Banana	cytosol	63.64	69.31
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	62.27	67.99
VIT_02s0012g01330.t01	Wine grape	cytosol	62.5	67.9
GSMUA_Achr4P28870_001	Banana	cytosol	62.05	67.57
KRH75607	Soybean	cytosol	61.82	67.49
Zm00001d034885_P002	Maize	cytosol	62.95	66.59
GSMUA_Achr4P21720_001	Banana	cytosol	60.91	66.01
Solyc08g005070.2.1	Tomato	cytosol	59.77	65.42
GSMUA_Achr11P...	Banana	cytosol	59.77	65.42
PGSC0003DMT400002955	Potato	cytosol	59.55	64.53
Zm00001d012827_P002	Maize	cytosol	61.59	64.37
Solyc08g076920.2.1	Tomato	nucleus	59.55	63.59
Bra013265.1-P	Field mustard	cytosol	56.36	62.94
PGSC0003DMT400045159	Potato	cytosol	58.86	62.86
CDX78809	Canola	cytosol	55.68	62.66
CDY44506	Canola	cytosol	56.36	62.63
CDY58500	Canola	cytosol	56.59	62.09
CDX77687	Canola	cytosol	56.59	61.94
CDY01499	Canola	cytosol	56.59	61.18
Bra024999.1-P	Field mustard	cytosol	50.68	61.1
AT5G46750.1	Thale cress	cytosol	55.68	60.95
CDX90439	Canola	cytosol	56.59	60.73
AT4G17890.1	Thale cress	cytosol	55.91	59.56
AT2G35210.1	Thale cress	cytosol	52.95	58.99
CDY59045	Canola	cytosol	51.59	57.76
Bra017330.1-P	Field mustard	cytosol	50.91	56.85
Zm00001d009353_P001	Maize	cytosol	7.27	26.45
Bra012634.1-P	Field mustard	cytosol	56.59	24.34
Zm00001d015981_P001	Maize	peroxisome	7.27	20.91
Zm00001d004245_P003	Maize	cytosol	8.86	20.31
Zm00001d007856_P001	Maize	cytosol	12.27	19.85
Zm00001d047793_P001	Maize	extracellular, plasma membrane	18.64	18.1
Zm00001d028656_P001	Maize	mitochondrion	18.64	18.06
Zm00001d006602_P001	Maize	cytosol	18.86	16.73
Zm00001d021802_P001	Maize	cytosol	17.5	16.08
Zm00001d049871_P001	Maize	cytosol	4.55	10.47
Zm00001d015278_P001	Maize	mitochondrion	7.95	10.42
Zm00001d016547_P001	Maize	cytosol, plastid	10.45	8.65
Zm00001d046873_P001	Maize	cytosol, plastid	10.45	8.65
Zm00001d051030_P001	Maize	cytosol, plastid	10.45	8.65
Zm00001d051188_P001	Maize	cytosol	2.5	8.33
Zm00001d023982_P001	Maize	cytosol	7.27	8.23
Zm00001d031667_P006	Maize	cytosol	14.32	7.65
Zm00001d049872_P001	Maize	cytosol	9.32	7.47
Zm00001d021087_P003	Maize	cytosol	13.41	7.05
Zm00001d051187_P009	Maize	plastid	8.64	5.39
Zm00001d032879_P001	Maize	extracellular	1.82	3.69
Zm00001d016932_P001	Maize	endoplasmic reticulum	0.68	1.64
Zm00001d031462_P001	Maize	endoplasmic reticulum, extracellular	0.68	1.57

Protein Annotations

EntrezGene:100283451	Gene3D:3.30.40.160	MapMan:35.1	UniProt:A0A1D6P636	ProteinID:AQL05393.1	InterPro:ARFGAP/RecO
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164	InterPro:IPR038508	PFAM:PF01412
PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF381	SMART:SM00105	SUPFAM:SSF57863
UniParc:UPI000843D2E1	EnsemblPlantsGene:Zm00001d047020	EnsemblPlants:Zm00001d047020_P002	EnsemblPlants:Zm00001d047020_T002	SEG:seg	:

Description

ADP-ribosylation factor GTPase-activating protein AGD10

Coordinates

chr9:+:115522400..115532772

Molecular Weight (calculated)

47766.0 Da

IEP (calculated)

9.587

GRAVY (calculated)

-0.512

Length

440 amino acids

Sequence
(BLAST)

001: MAATEASADK NAVFRKLRTK SDNKMCFDCN AKNPTWASVT YGVFLCIDCS AVHRSLGVHV SFVRSPRLAS PHLTCFPFLL TLVHCHRSSM LQATICRSTN
101: LDSWTPEQLK MMVYGGNNRA QAFFKQHGWT DGGKIEAKYT SRAADLYRQL LAKEVAKSAT EDGNNSWPSS PVAASQASDQ TAAFPDLKLT EVSKENVSEK
201: EDSEIVRSPR VPTRSIKKPI GAKKPGNKTG GLGARKLTSK PNESLYEQKP EETAPVLPSS VIASTTARSK PHTSRFEYVE NAPAPKTGSS SEGNLMSGHV
301: APPKSSNFFV EFGMDSGYHK KSTSSSSKVQ IEESSEARQK FSNAKSISSS QFFGDQASFE KDTQVSLQKF SGSSAISSAD LFGHPANNSS VDLSASDLIN
401: RISFQATQDL SSLKNMAGET GKRLTSMASN IITDLQDRIL

Best Arabidopsis Sequence Match ( AT2G35210.1 )
(BLAST)

001: MASENLNDKI SVFKKLKAKS DNKICFDCNA KNPTWASVTY GIFLCIDCSA VHRSLGVHIS FVRSTNLDSW SSEQLKMMIY GGNNRAQVFF KQYGWSDGGK
101: TEAKYTSRAA DLYKQILAKE VAKSKAEEEL DLPPSPPDST QVPNGLSSIK TSEALKESNT LKQQEKPDVV PVSPRISRSV KKPLGAKKTG KTGGLGARKL
201: TTKSSGTLYD QKPEESVIIQ ATSPVSAKSA RSSFSSRFDY ADNVQNREDY MSPQVVSHVA PPKSSGFFEE ELEMNGGRFQ KKPITSSSKL QIQETDEARK
301: KFTNAKSISS AQYFGNDNNS ADLEAKSSLK KFSGSSAISS ADLFGDGDGD FPLDLTAGDL LNRLSLQAQQ DISSLKNMAE ETKKKLGSVA SSLWV

Arabidopsis Description

AGD10RPA [Source:UniProtKB/TrEMBL;Acc:A0A178VQN0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.