Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013265.1-P | Field mustard | cytosol | 86.44 | 90.61 |
| CDX78809 | Canola | cytosol | 85.47 | 90.28 |
| CDY44506 | Canola | cytosol | 86.2 | 89.9 |
| CDX90439 | Canola | cytosol | 88.62 | 89.27 |
| CDY01499 | Canola | cytosol | 87.41 | 88.7 |
| AT5G46750.1 | Thale cress | cytosol | 77.48 | 79.6 |
| KRH45437 | Soybean | endoplasmic reticulum, mitochondrion | 69.25 | 70.97 |
| KRH75607 | Soybean | cytosol | 68.52 | 70.22 |
| VIT_02s0012g01330.t01 | Wine grape | cytosol | 68.52 | 69.88 |
| Solyc08g005070.2.1 | Tomato | cytosol | 64.65 | 66.42 |
| PGSC0003DMT400002955 | Potato | cytosol | 64.89 | 66.01 |
| Solyc08g076920.2.1 | Tomato | nucleus | 65.38 | 65.53 |
| PGSC0003DMT400045159 | Potato | cytosol | 64.89 | 65.05 |
| GSMUA_Achr4P28870_001 | Banana | cytosol | 62.95 | 64.36 |
| GSMUA_Achr11P... | Banana | cytosol | 62.47 | 64.18 |
| GSMUA_Achr2P18150_001 | Banana | cytosol | 62.23 | 63.61 |
| GSMUA_Achr4P21720_001 | Banana | cytosol | 62.23 | 63.3 |
| AT2G35210.1 | Thale cress | cytosol | 60.29 | 63.04 |
| Os10t0574800-01 | Rice | plasma membrane | 61.02 | 61.92 |
| EER91883 | Sorghum | cytosol | 60.29 | 61.18 |
| Zm00001d034885_P002 | Maize | cytosol | 60.77 | 60.34 |
| TraesCS1A01G193000.1 | Wheat | cytosol | 59.08 | 60.25 |
| TraesCS1D01G196700.1 | Wheat | cytosol | 59.08 | 60.25 |
| EER90493 | Sorghum | cytosol | 60.53 | 60.1 |
| Os03t0854100-01 | Rice | cytosol | 59.08 | 59.22 |
| Zm00001d012827_P002 | Maize | cytosol | 60.29 | 59.14 |
| TraesCS4A01G323700.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 56.66 | 56.52 |
| TraesCS5D01G554100.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 56.17 | 56.04 |
| Zm00001d047020_P002 | Maize | cytosol | 59.56 | 55.91 |
| TraesCS1B01G207900.1 | Wheat | mitochondrion, plastid | 58.84 | 51.59 |
| Zm00001d030031_P002 | Maize | plastid | 59.81 | 51.14 |
| TraesCS5B01G554600.1 | Wheat | cytosol, plastid | 55.93 | 50.0 |
| HORVU5Hr1G123590.1 | Barley | cytosol | 56.42 | 47.84 |
| Bra012634.1-P | Field mustard | cytosol | 88.86 | 35.87 |
| HORVU1Hr1G047800.23 | Barley | plastid | 20.82 | 25.44 |
| AT3G17660.2 | Thale cress | nucleus | 12.35 | 20.73 |
| AT3G53710.2 | Thale cress | cytosol | 22.76 | 20.48 |
| AT2G37550.1 | Thale cress | mitochondrion | 22.03 | 19.96 |
| AT5G54310.1 | Thale cress | cytosol | 19.13 | 16.36 |
| AT5G13300.1 | Thale cress | cytosol | 15.5 | 7.74 |
| AT5G61980.1 | Thale cress | cytosol | 15.5 | 7.73 |
| AT1G10870.2 | Thale cress | cytosol | 14.53 | 7.69 |
| AT1G60860.1 | Thale cress | cytosol | 14.29 | 7.6 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | EntrezGene:827512 | UniProt:A0A178UXQ2 | ProteinID:AEE83961.1 | ProteinID:AEE83962.1 |
| EMBL:AF360177 | Symbol:AGD8 | EMBL:AK175252 | EMBL:AK176287 | EMBL:AK176618 | EMBL:AK221239 |
| EMBL:AK221371 | EMBL:AK229721 | EMBL:AK317033 | InterPro:ARFGAP/RecO | ArrayExpress:AT4G17890 | EnsemblPlantsGene:AT4G17890 |
| RefSeq:AT4G17890 | TAIR:AT4G17890 | RefSeq:AT4G17890-TAIR-G | EnsemblPlants:AT4G17890.1 | TAIR:AT4G17890.1 | InterPro:ArfGAP_dom |
| InterPro:ArfGAP_dom_sf | Unigene:At.66582 | EMBL:BT000968 | ProteinID:CAA17132.1 | ProteinID:CAB78791.1 | GO:GO:0003674 |
| GO:GO:0005096 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | InterPro:IPR001164 |
| InterPro:IPR038508 | RefSeq:NP_001031658.1 | RefSeq:NP_567543.1 | ProteinID:OAO98310.1 | PFAM:PF01412 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00405 | PFscan:PS50115 | PANTHER:PTHR23180 |
| PANTHER:PTHR23180:SF381 | UniProt:Q8H100 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI00000ADB1F | SEG:seg |
Description
AGD8Probable ADP-ribosylation factor GTPase-activating protein AGD8 [Source:UniProtKB/Swiss-Prot;Acc:Q8H100]
Coordinates
chr4:+:9936861..9939493
Molecular Weight (calculated)
44443.6 Da
IEP (calculated)
9.023
GRAVY (calculated)
-0.546
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSADNLT DKNIVFRKLK SKSENKVCFD CSAKNPTWAS VTYGIFLCID CSATHRNLGV HISFVRSTNL DSWSPEQLRT MMFGGNNRAQ VFFKQHGWTD
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL
401: ASGIFSDIQD RML
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL
401: ASGIFSDIQD RML
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.