Factsheet for Os10t0574800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 3
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91883	Sorghum	cytosol	86.0	86.0
TraesCS1A01G193000.1	Wheat	cytosol	83.29	83.7
TraesCS1D01G196700.1	Wheat	cytosol	82.8	83.21
Zm00001d047020_P002	Maize	cytosol	83.78	77.5
Zm00001d030031_P002	Maize	plastid	84.77	71.43
TraesCS1B01G207900.1	Wheat	mitochondrion, plastid	82.56	71.34
GSMUA_Achr2P18150_001	Banana	cytosol	68.8	69.31
GSMUA_Achr4P28870_001	Banana	cytosol	68.3	68.81
KRH75607	Soybean	cytosol	67.32	67.99
Os03t0854100-01	Rice	cytosol	68.8	67.96
VIT_02s0012g01330.t01	Wine grape	cytosol	67.32	67.65
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	66.83	67.49
GSMUA_Achr11P...	Banana	cytosol	65.85	66.67
GSMUA_Achr4P21720_001	Banana	cytosol	66.34	66.5
Solyc08g005070.2.1	Tomato	cytosol	63.88	64.68
CDY44506	Canola	cytosol	61.92	63.64
PGSC0003DMT400002955	Potato	cytosol	63.39	63.55
Bra013265.1-P	Field mustard	cytosol	61.43	63.45
CDX78809	Canola	cytosol	60.69	63.17
PGSC0003DMT400045159	Potato	cytosol	63.88	63.11
Solyc08g076920.2.1	Tomato	nucleus	63.64	62.86
CDY01499	Canola	cytosol	62.65	62.65
CDY58500	Canola	cytosol	61.67	62.59
CDX90439	Canola	cytosol	62.65	62.2
Bra024999.1-P	Field mustard	cytosol	55.77	62.19
CDX77687	Canola	cytosol	61.43	62.19
AT5G46750.1	Thale cress	cytosol	60.93	61.69
AT4G17890.1	Thale cress	cytosol	61.92	61.02
AT2G35210.1	Thale cress	cytosol	58.23	60.0
CDY59045	Canola	cytosol	55.53	57.51
Bra017330.1-P	Field mustard	cytosol	55.28	57.11
Bra012634.1-P	Field mustard	cytosol	62.41	24.83
Os03t0278400-01	Rice	plasma membrane	21.62	19.43
Os07t0563800-02	Rice	cytosol	17.94	15.34
Os09t0510700-01	Rice	cytosol	16.95	8.25
Os08t0537600-01	Rice	plasma membrane	16.71	8.18
Os02t0632500-01	Rice	cytosol, plasma membrane	12.78	6.84

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	EntrezGene:4349482	ProteinID:AAK00450.1	ProteinID:AAP55136.1	InterPro:ARFGAP/RecO
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	ProteinID:BAF27314.1	ProteinID:BAT12188.1	GO:GO:0003674	GO:GO:0005096
GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164
InterPro:IPR038508	EnsemblPlantsGene:Os10g0574800	EnsemblPlants:Os10t0574800-01	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115
PANTHER:PTHR23180	PANTHER:PTHR23180:SF381	UniProt:Q7XBX2	SMART:SM00105	SUPFAM:SSF57863	UniParc:UPI00000AAFFC
RefSeq:XP_015615021.1	SEG:seg	:	:	:	:

Description

Similar to ARF GAP-like zinc finger-containing protein ZIGA2 (Fragment). (Os10t0574800-01)

Coordinates

chr10:-:22836686..22840718

Molecular Weight (calculated)

43995.1 Da

IEP (calculated)

9.045

GRAVY (calculated)

-0.639

Length

407 amino acids

Sequence
(BLAST)

001: MATDSSSSAA ADKNTVFRKL RAKSDNKMCF DCNAKNPTWA SVTYGVFLCI DCSAVHRSLG VHVSFVRSTN LDSWTPEQLK MMVYGGNNRA QAFFKQHGWT
101: DGGKIEAKYT SRAADLYRQL LAKDVAKNST EDGNNSWPSS PVAASQPTNQ ADAIPDLKLA EASKEVANEK TEPEVIRSPR APTHSFKKPI VAKKPGNKTG
201: GLGARKLTSK PNESLYEQKP EELAPALPPV TENSTAKSKS HTSRFEYVEN TPSAGSNSEE NQVIGHVAPP KSSNFFGEFG MDSGYHKKSA PGPSKVQIEE
301: SSEARQKFSN AKSISSSQFF GDQASFEKEA QVSLQKFSGS SAISSADLFG HPTNSSNVDL SASDLINRLS FQASQDLSSI KNMAGETGKK LTSLASNIMS
401: DLQDRIL

Best Arabidopsis Sequence Match ( AT4G17890.1 )
(BLAST)

001: MASSSADNLT DKNIVFRKLK SKSENKVCFD CSAKNPTWAS VTYGIFLCID CSATHRNLGV HISFVRSTNL DSWSPEQLRT MMFGGNNRAQ VFFKQHGWTD
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL
401: ASGIFSDIQD RML

Arabidopsis Description

AGD8Probable ADP-ribosylation factor GTPase-activating protein AGD8 [Source:UniProtKB/Swiss-Prot;Acc:Q8H100]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.