Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77687 | Canola | cytosol | 85.57 | 85.57 |
| Bra024999.1-P | Field mustard | cytosol | 77.36 | 85.21 |
| CDY58500 | Canola | cytosol | 84.33 | 84.54 |
| AT4G17890.1 | Thale cress | cytosol | 79.6 | 77.48 |
| KRH45437 | Soybean | endoplasmic reticulum, mitochondrion | 67.16 | 67.0 |
| KRH75607 | Soybean | cytosol | 66.42 | 66.25 |
| Solyc08g076920.2.1 | Tomato | nucleus | 67.66 | 66.02 |
| VIT_02s0012g01330.t01 | Wine grape | cytosol | 66.42 | 65.93 |
| Solyc08g005070.2.1 | Tomato | cytosol | 65.42 | 65.42 |
| PGSC0003DMT400045159 | Potato | cytosol | 66.92 | 65.29 |
| PGSC0003DMT400002955 | Potato | cytosol | 65.67 | 65.02 |
| AT2G35210.1 | Thale cress | cytosol | 61.94 | 63.04 |
| GSMUA_Achr4P28870_001 | Banana | cytosol | 62.44 | 62.13 |
| GSMUA_Achr11P... | Banana | cytosol | 61.44 | 61.44 |
| GSMUA_Achr4P21720_001 | Banana | cytosol | 61.94 | 61.33 |
| EER91883 | Sorghum | cytosol | 61.94 | 61.18 |
| Os10t0574800-01 | Rice | plasma membrane | 61.69 | 60.93 |
| GSMUA_Achr2P18150_001 | Banana | cytosol | 59.95 | 59.65 |
| Os03t0854100-01 | Rice | cytosol | 60.95 | 59.47 |
| TraesCS1A01G193000.1 | Wheat | cytosol | 59.7 | 59.26 |
| Zm00001d012827_P002 | Maize | cytosol | 61.94 | 59.14 |
| TraesCS1D01G196700.1 | Wheat | cytosol | 59.2 | 58.77 |
| Zm00001d034885_P002 | Maize | cytosol | 60.45 | 58.41 |
| EER90493 | Sorghum | cytosol | 60.2 | 58.17 |
| TraesCS4A01G323700.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 58.21 | 56.52 |
| TraesCS5D01G554100.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 57.96 | 56.28 |
| Zm00001d047020_P002 | Maize | cytosol | 60.95 | 55.68 |
| TraesCS1B01G207900.1 | Wheat | mitochondrion, plastid | 59.45 | 50.74 |
| TraesCS5B01G554600.1 | Wheat | cytosol, plastid | 58.21 | 50.65 |
| Zm00001d030031_P002 | Maize | plastid | 60.45 | 50.31 |
| HORVU5Hr1G123590.1 | Barley | cytosol | 58.46 | 48.25 |
| HORVU1Hr1G047800.23 | Barley | plastid | 20.65 | 24.56 |
| AT3G17660.2 | Thale cress | nucleus | 12.94 | 21.14 |
| AT3G53710.2 | Thale cress | cytosol | 23.13 | 20.26 |
| AT2G37550.1 | Thale cress | mitochondrion | 22.39 | 19.74 |
| AT5G54310.1 | Thale cress | cytosol | 19.9 | 16.56 |
| AT1G10870.2 | Thale cress | cytosol | 15.67 | 8.08 |
| AT5G61980.1 | Thale cress | cytosol | 16.17 | 7.85 |
| AT1G60860.1 | Thale cress | cytosol | 14.93 | 7.73 |
| AT5G13300.1 | Thale cress | cytosol | 15.67 | 7.62 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | EntrezGene:834718 | UniProt:A0A178UAW4 | ProteinID:AED95421.1 | Symbol:AGD9 |
| InterPro:ARFGAP/RecO | ArrayExpress:AT5G46750 | EnsemblPlantsGene:AT5G46750 | RefSeq:AT5G46750 | TAIR:AT5G46750 | RefSeq:AT5G46750-TAIR-G |
| EnsemblPlants:AT5G46750.1 | TAIR:AT5G46750.1 | EMBL:AY099693 | EMBL:AY128872 | InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf |
| Unigene:At.29932 | ProteinID:BAB08919.1 | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009737 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | InterPro:IPR001164 |
| InterPro:IPR038508 | RefSeq:NP_199487.1 | ProteinID:OAO90242.1 | PFAM:PF01412 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00405 | PFscan:PS50115 |
| PANTHER:PTHR23180 | PANTHER:PTHR23180:SF381 | UniProt:Q9FIQ0 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI000009F3D7 |
| SEG:seg | : | : | : | : | : |
Description
AGD9AGD9 [Source:UniProtKB/TrEMBL;Acc:A0A178UAW4]
Coordinates
chr5:-:18969736..18971981
Molecular Weight (calculated)
43552.6 Da
IEP (calculated)
8.585
GRAVY (calculated)
-0.552
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MATENLTDKN VVFRKLKSKS ENKVCFDCSA KNPTWASVPY GIFLCIDCSA VHRSLGVHIS FVRSTNLDSW SPEQLRTMMF GGNNRAQVFF KQHGWNDGGK
101: IEAKYTSRAA DMYRQTLAKE VAKAMAEETV LPSLSSVATS QPVESSENGF TSESPKESSL KQEAAVVSSP KASQKVVAST FKKPLVSRKS GKTGGLGARK
201: LTTKSKDNLY EQKPEEPVPV IPAASPTNDT SAAGSSFASR FEYFDDEQSG GQSGTRVLSH VAPPKSSNFF NEFGMDSAFP KKSSSSSSKA QVEETDEARK
301: KFSNAKSISS AQFFGNQNRD ADLDSKATLQ KFSGSAAISS SDLFGHGPDD SNIDITASDL INRISFQAQQ DMSSIANLAE ETKNKLGTFA SSIFSDLQDR
401: ML
101: IEAKYTSRAA DMYRQTLAKE VAKAMAEETV LPSLSSVATS QPVESSENGF TSESPKESSL KQEAAVVSSP KASQKVVAST FKKPLVSRKS GKTGGLGARK
201: LTTKSKDNLY EQKPEEPVPV IPAASPTNDT SAAGSSFASR FEYFDDEQSG GQSGTRVLSH VAPPKSSNFF NEFGMDSAFP KKSSSSSSKA QVEETDEARK
301: KFSNAKSISS AQFFGNQNRD ADLDSKATLQ KFSGSAAISS SDLFGHGPDD SNIDITASDL INRISFQAQQ DMSSIANLAE ETKNKLGTFA SSIFSDLQDR
401: ML
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.