CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	96.77	96.77
VIT_02s0012g01330.t01	Wine grape	cytosol	78.91	78.52
Solyc08g005070.2.1	Tomato	cytosol	72.21	72.39
PGSC0003DMT400002955	Potato	cytosol	72.46	71.92
PGSC0003DMT400045159	Potato	cytosol	71.71	70.15
Solyc08g076920.2.1	Tomato	nucleus	71.22	69.66
GSMUA_Achr2P18150_001	Banana	cytosol	69.73	69.55
AT4G17890.1	Thale cress	cytosol	70.22	68.52
Bra013265.1-P	Field mustard	cytosol	66.75	68.27
GSMUA_Achr11P...	Banana	cytosol	67.99	68.16
CDX78809	Canola	cytosol	66.0	68.03
CDY44506	Canola	cytosol	66.75	67.93
EER91883	Sorghum	cytosol	68.49	67.81
CDX90439	Canola	cytosol	68.73	67.56
GSMUA_Achr4P21720_001	Banana	cytosol	67.99	67.49
CDX77687	Canola	cytosol	67.25	67.41
CDY01499	Canola	cytosol	67.99	67.32
Os10t0574800-01	Rice	plasma membrane	67.99	67.32
CDY58500	Canola	cytosol	66.5	66.83
EER90493	Sorghum	cytosol	68.73	66.59
Bra024999.1-P	Field mustard	cytosol	60.3	66.58
AT5G46750.1	Thale cress	cytosol	66.25	66.42
GSMUA_Achr4P28870_001	Banana	cytosol	66.5	66.34
Os03t0854100-01	Rice	cytosol	67.25	65.78
AT2G35210.1	Thale cress	cytosol	64.27	65.57
Zm00001d034885_P002	Maize	cytosol	67.0	64.9
TraesCS1A01G193000.1	Wheat	cytosol	65.01	64.69
TraesCS1D01G196700.1	Wheat	cytosol	64.76	64.44
Zm00001d012827_P002	Maize	cytosol	66.75	63.9
CDY59045	Canola	cytosol	60.3	61.83
Zm00001d047020_P002	Maize	cytosol	67.49	61.82
TraesCS5D01G554100.1	Wheat	cytosol, nucleus, peroxisome, plastid	63.28	61.59
TraesCS4A01G323700.1	Wheat	cytosol, nucleus, peroxisome, plastid	62.78	61.11
Bra017330.1-P	Field mustard	cytosol	59.55	60.91
Zm00001d030031_P002	Maize	plastid	67.99	56.73
TraesCS1B01G207900.1	Wheat	mitochondrion, plastid	64.76	55.41
TraesCS5B01G554600.1	Wheat	cytosol, plastid	63.28	55.19
HORVU5Hr1G123590.1	Barley	cytosol	63.52	52.57
Bra012634.1-P	Field mustard	cytosol	68.98	27.18
KRH15700	Soybean	cytosol	12.66	26.29
HORVU1Hr1G047800.23	Barley	plastid	21.59	25.74
KRH09434	Soybean	cytosol	13.4	22.13
KRH38902	Soybean	cytosol	13.15	21.81
KRH32302	Soybean	mitochondrion	22.08	18.58
KRH19707	Soybean	cytosol	22.08	18.5
KRH67539	Soybean	mitochondrion	21.59	17.9
KRH22157	Soybean	cytosol	21.34	17.88
KRG95812	Soybean	endoplasmic reticulum	21.59	17.79
KRH27179	Soybean	cytosol	21.09	17.56
KRH26038	Soybean	cytosol	21.34	17.2
KRH41906	Soybean	cytosol	12.66	17.06
KRH55419	Soybean	cytosol	20.1	15.7
KRH30767	Soybean	nucleus	7.44	12.35
KRH59741	Soybean	cytosol	15.63	7.88
KRH24228	Soybean	cytosol	14.64	7.6
KRH45201	Soybean	cytosol	15.38	7.53
KRH29237	Soybean	cytosol	14.39	7.47
KRH01512	Soybean	cytosol	15.14	7.27
KRH63858	Soybean	cytosol	13.9	7.13
KRH54108	Soybean	cytosol	11.66	6.37

Protein Annotations

EntrezGene:100789796	MapMan:22.3.4.2	Gene3D:3.30.40.160	EMBL:ACUP02000415	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_01G096300	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488
GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	UniProt:I1J6C3	InterPro:IPR001164
InterPro:IPR038508	EnsemblPlants:KRH75607	ProteinID:KRH75607	ProteinID:KRH75607.1	ProteinID:KRH75609.1	PFAM:PF01412
PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF381	SMART:SM00105	SUPFAM:SSF57863
UniParc:UPI0002336FAE	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:30959146..30965151

Molecular Weight (calculated)

43181.4 Da

IEP (calculated)

9.461

GRAVY (calculated)

-0.596

Length

403 amino acids

Sequence
(BLAST)

001: MASDGFTDKN TVFRKLKAKS ENKMCFDCNA KNPTWASVTY GIFLCIDCSA VHRSLGVHIS FVRSTNLDSW SPEQLKTMSF GGNNRAHGFF KQHGWTDGGK
101: IEAKYTSRAA DLYRQILSKE VAKSMAEDGG LPSSPVASQS AQGVNGLPEV KTNEVPKENT LEKPEKPEST SSPRASHSVI SGTVKKPIGA KKAVKSGGLG
201: ARKLTKKPSE SLYEQKPEEP PAPVPSSTNS MPAGPSPTSR FEYVENVQSS DLNTGGSHVL SHVSPPKSSS FFADFGMDGG FPKKSGPSSS KVQIQETDEA
301: RRKFSNAKSI SSSQFFGDQN KAADVDSQAT LSKFSGSSAI SSADLFGDSR DNNIDLTAGD LINRLSFQAQ QDLSSLKNIA GETGKKLSSL ASTLMTDLQD
401: RIL

Best Arabidopsis Sequence Match ( AT4G17890.1 )
(BLAST)

001: MASSSADNLT DKNIVFRKLK SKSENKVCFD CSAKNPTWAS VTYGIFLCID CSATHRNLGV HISFVRSTNL DSWSPEQLRT MMFGGNNRAQ VFFKQHGWTD
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL
401: ASGIFSDIQD RML

Arabidopsis Description

AGD8Probable ADP-ribosylation factor GTPase-activating protein AGD8 [Source:UniProtKB/Swiss-Prot;Acc:Q8H100]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.