CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22157	Soybean	cytosol	97.94	49.48
KRH27179	Soybean	cytosol	91.77	46.07
KRH26038	Soybean	cytosol	76.13	37.0
KRH55419	Soybean	cytosol	68.72	32.36
VIT_19s0014g03510.t01	Wine grape	cytosol	59.26	30.13
Solyc07g063550.2.1	Tomato	cytosol	55.97	28.63
PGSC0003DMT400049649	Potato	cytosol	54.32	27.79
AT5G54310.1	Thale cress	cytosol	51.03	25.67
Bra002995.1-P	Field mustard	cytosol	49.79	25.53
CDY63834	Canola	cytosol	49.38	25.32
CDY43831	Canola	cytosol	48.97	24.69
CDY43044	Canola	cytosol	48.15	24.48
CDY64205	Canola	endoplasmic reticulum	48.97	24.14
Bra029030.1-P	Field mustard	cytosol	47.33	24.06
CDY52243	Canola	cytosol	46.5	23.99
Bra022711.1-P	Field mustard	cytosol	46.09	23.73
CDY28774	Canola	endoplasmic reticulum, plasma membrane	46.91	23.12
PGSC0003DMT400064425	Potato	cytosol	42.39	21.87
Solyc10g006850.2.1	Tomato	cytosol	42.8	20.8
Zm00001d046873_P001	Maize	cytosol, plastid	40.74	18.61
Zm00001d016547_P001	Maize	cytosol, plastid	40.74	18.61
Zm00001d051030_P001	Maize	cytosol, plastid	40.74	18.61
KRH38902	Soybean	cytosol	17.7	17.7
KRH15700	Soybean	cytosol	13.99	17.53
KRH09434	Soybean	cytosol	16.46	16.39
KRH41906	Soybean	cytosol	19.75	16.05
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	12.35	7.44
KRH75607	Soybean	cytosol	12.35	7.44
KRH67539	Soybean	mitochondrion	13.17	6.58
KRG95812	Soybean	endoplasmic reticulum	12.76	6.34
KRH32302	Soybean	mitochondrion	12.35	6.26
KRH19707	Soybean	cytosol	12.35	6.24
KRH63858	Soybean	cytosol	12.35	3.82
KRH29237	Soybean	cytosol	11.52	3.61
KRH01512	Soybean	cytosol	12.35	3.58
KRH45201	Soybean	cytosol	11.93	3.52
KRH24228	Soybean	cytosol	11.11	3.48
KRH59741	Soybean	cytosol	10.29	3.12
KRH54108	Soybean	cytosol	9.05	2.98

Protein Annotations

EMBL:ACUP02007071	EnsemblPlants:KRH30767	EnsemblPlantsGene:GLYMA_11G205900	Gene3D:3.30.40.160	InterPro:ArfGAP_dom_sf	InterPro:IPR038508
PANTHER:PTHR23180	PANTHER:PTHR23180:SF160	ProteinID:KRH30767	ProteinID:KRH30767.1	SEG:seg	UniParc:UPI0006ED9524
UniProt:A0A0R0HXA7	MapMan:22.3.4.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:29004868..29006164

Molecular Weight (calculated)

26833.1 Da

IEP (calculated)

5.445

GRAVY (calculated)

-0.891

Length

243 amino acids

Sequence
(BLAST)

001: MGNEKANCFW EAELPPNYDR VGIENFIRAK YDEKRWVPRD GNSKTPSGFR EEKSPSHWQR PVERSGYAAV SENKFEERKK IQPSTAIPAA RINVPAPPRA
101: SEQVTPITKP QHVEKVESVA PQPQAPQPLA ETSKQATDTV KNTPPKVDYA TYLFNMLSMD GPNENGSEAA GTTTDDNHWA GFQSAAEVST AEKTSPLKAA
201: DSTPASASGI EDLFKDLHPV TPSLTPEKPQ RDVKNDIMSL FEK

Best Arabidopsis Sequence Match ( AT5G54310.1 )
(BLAST)

001: MNEKANVSKE LNARHRKILE GLLKHPENRE CADCKTKGPR WASVNLGIFI CMQCSGIHRS LGVHISKVRS ATLDTWLPEQ VAFIQSMGND KANSYWEAEL
101: PPNYDRVGIE NFIRAKYEEK RWVSRGEKAR SPPRVEQERR KSVERSGPGY EHGHSSSPVN LFEERKTIPA SRTRNNVAAT RINLPVPPQG PSQVIKPQQK
201: MESAATPVER EKQAVNVAPA SDPPKVDFAT DLFNMLSMDD STTNTSEATP GDTPADDNSW AGFQSAGSGQ TAEKIVTAKP AESSSPPASS SDFEDLFKDT
301: PNLTTQQAPK DVKGDIMSLF EKTNIVSPFA MHQQQVAMLA QQQALYMAAA KAAGGTPNGV NQQAIANALN VASANWSNPG GYQIPGMTNP VGGQADLQKL
401: MQNMNMNANM NTRPAQPQEN TLQYPSSSFY TMGQANQVNG MTPNSTGKPQ SSSATQPTST TPSSQSGKDF DFSSLMDGMF TKH

Arabidopsis Description

AGD5Nevershed [Source:UniProtKB/TrEMBL;Acc:C4NZX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.