CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38902	Soybean	cytosol	60.87	74.9
KRH15700	Soybean	cytosol	48.49	74.74
KRH09434	Soybean	cytosol	58.86	72.13
VIT_17s0053g00430.t01	Wine grape	cytosol	46.82	54.26
PGSC0003DMT400026308	Potato	cytosol, endoplasmic reticulum, nucleus	33.78	42.98
Solyc03g098500.2.1	Tomato	nucleus	33.44	40.32
AT3G17660.2	Thale cress	nucleus	33.11	40.24
CDX92147	Canola	cytosol	33.78	39.76
CDX95838	Canola	cytosol	33.78	39.76
Bra021263.1-P	Field mustard	cytosol	34.45	37.59
KRH22157	Soybean	cytosol	41.14	25.57
KRH27179	Soybean	cytosol	41.14	25.41
KRH26038	Soybean	cytosol	40.47	24.2
KRH55419	Soybean	cytosol	39.46	22.87
KRH30767	Soybean	nucleus	16.05	19.75
KRH75607	Soybean	cytosol	17.06	12.66
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	17.06	12.66
KRH67539	Soybean	mitochondrion	16.72	10.29
KRG95812	Soybean	endoplasmic reticulum	16.72	10.22
KRH32302	Soybean	mitochondrion	16.05	10.02
KRH19707	Soybean	cytosol	16.05	9.98
KRH59741	Soybean	cytosol	24.08	9.0
KRH63858	Soybean	cytosol	22.74	8.66
KRH45201	Soybean	cytosol	23.75	8.63
KRH01512	Soybean	cytosol	23.75	8.46
KRH29237	Soybean	cytosol	21.07	8.12
KRH24228	Soybean	cytosol	20.74	7.99
KRH54108	Soybean	cytosol	17.39	7.05

Protein Annotations

EntrezGene:100803735	MapMan:22.3.4.2	Gene3D:3.30.40.160	EMBL:ACUP02004781	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	EnsemblPlantsGene:GLYMA_08G057700	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164	InterPro:IPR038508	UniProt:K7L557
EnsemblPlants:KRH41906	ProteinID:KRH41906	ProteinID:KRH41906.1	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115
PANTHER:PTHR23180	PANTHER:PTHR23180:SF160	SMART:SM00105	SUPFAM:SSF57863	UniParc:UPI000294E049	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:4429427..4436914

Molecular Weight (calculated)

33540.1 Da

IEP (calculated)

10.061

GRAVY (calculated)

-0.543

Length

299 amino acids

Sequence
(BLAST)

001: MNGKASISKE LNAKHAKVED GHRKTILMLP LSQLMLGHLS SQSISKSSSV QPIRTISQLS SLSQSCRLKI LEGLLKLPEN RECADCRNKA PRWASVNLGI
101: FICMQCSGIH RSLGVHISKV RSTTLDTWLP DQVSFMQLMG NEKSNKHWEE KIPPNFDRSK LGIEKFIRDK YVEKRWASKE ELQSTSRTGE IIYNFDESPN
201: GGARSGILKN NRRLSLEESI LANHVAQILP PITRSRGGFT FIDTQKKNSP PLKRPSSSVD FDKSTGKSNG TGDIFNLLCI YDDNQNFSTM PPSSWATFD

Best Arabidopsis Sequence Match ( AT3G17660.1 )
(BLAST)

001: MNRKASVSKE LNAKHSKILE ALLKHPDNRE CADCRSKAPR WASVNLGIFI CMQCSGIHRS LGVHISQVRS ITLDTWLPDQ VAFMKSTGNA KGNEYWESEL
101: PQHFERSSSD TFIRAKYSEK RWVSPGAIQP APIVSQLSCK VSHLVESGYK PETPKKARTL SLDEEILLHH VLQVTPPETR TRAGSVDMKE NVYVVPLPEF
201: KKPNQKNENF SSEVNQNRRT TIAPPSSWAT FD

Arabidopsis Description

AGD15ARF-GAP domain 15 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR18]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.