Factsheet for Bra021263.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G17660.2	Thale cress	nucleus	63.14	70.33
CDX95838	Canola	cytosol	64.23	69.29
CDX92147	Canola	cytosol	64.23	69.29
KRH15700	Soybean	cytosol	37.59	53.09
VIT_17s0053g00430.t01	Wine grape	cytosol	40.88	43.41
KRH09434	Soybean	cytosol	38.32	43.03
PGSC0003DMT400026308	Potato	cytosol, endoplasmic reticulum, nucleus	36.5	42.55
KRH38902	Soybean	cytosol	37.59	42.39
Solyc03g098500.2.1	Tomato	nucleus	35.77	39.52
KRH41906	Soybean	cytosol	37.59	34.45
Bra022711.1-P	Field mustard	cytosol	43.07	25.0
Bra002995.1-P	Field mustard	cytosol	43.07	24.89
Bra029030.1-P	Field mustard	cytosol	42.7	24.48
Bra017330.1-P	Field mustard	cytosol	20.8	14.47
Bra024999.1-P	Field mustard	cytosol	17.88	13.42
Bra013265.1-P	Field mustard	cytosol	18.61	12.94
Bra017179.1-P	Field mustard	cytosol	20.8	12.93
Bra039812.1-P	Field mustard	cytosol	20.44	12.42
Bra007020.1-P	Field mustard	cytosol	20.07	12.11
Bra005187.1-P	Field mustard	cytosol	19.34	12.02
Bra000005.1-P	Field mustard	mitochondrion	20.8	11.95
Bra010046.1-P	Field mustard	cytosol	23.36	8.09
Bra006193.1-P	Field mustard	cytosol	23.36	7.87
Bra008838.1-P	Field mustard	cytosol	23.36	7.75
Bra029295.1-P	Field mustard	cytosol	24.09	7.66
Bra019896.1-P	Field mustard	cytosol	21.17	7.53
Bra027124.1-P	Field mustard	cytosol	18.25	6.57
Bra012634.1-P	Field mustard	cytosol	20.44	5.47
Bra026910.1-P	Field mustard	plastid	1.46	2.21

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	EnsemblPlantsGene:Bra021263
EnsemblPlants:Bra021263.1	EnsemblPlants:Bra021263.1-P	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001164	InterPro:IPR038508
UniProt:M4DXL7	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF160
SMART:SM00105	SUPFAM:SSF57863	SUPFAM:SSF57938	UniParc:UPI0002545406	:	:

Description

AT3G17660 (E=1e-093) AGD15 | AGD15 (ARF-GAP domain 15); ARF GTPase activator/ DNA binding / zinc ion binding

Coordinates

chrA01:-:22945101..22947573

Molecular Weight (calculated)

30629.8 Da

IEP (calculated)

8.937

GRAVY (calculated)

-0.518

Length

274 amino acids

Sequence
(BLAST)

001: MNGKASVSKE LNAKHSKILE ALLKQPDNRE CADCRSKAPR WASVNLGIFI CMQCSGIHRS LGVHISQVRS ITLDTWLPDQ VSFMQSTGNA KANQYWESEL
101: PLHFERSSSD AFIRAKYNEK KWVSPGGIQP SPIASQLSCK VSHLVESGYK PATPKKARTL SLDEDLFLKH ALQVTPPETR IRACGAKTET RRKEKGRCVI
201: CHGTGRVDCF NCSGKGRTNC VDMEMLPKGE WPKWCRSCGG SGLCECSRCL GTGEYRYIMG FRFLNKHDDV DPQL

Best Arabidopsis Sequence Match ( AT3G17660.1 )
(BLAST)

001: MNRKASVSKE LNAKHSKILE ALLKHPDNRE CADCRSKAPR WASVNLGIFI CMQCSGIHRS LGVHISQVRS ITLDTWLPDQ VAFMKSTGNA KGNEYWESEL
101: PQHFERSSSD TFIRAKYSEK RWVSPGAIQP APIVSQLSCK VSHLVESGYK PETPKKARTL SLDEEILLHH VLQVTPPETR TRAGSVDMKE NVYVVPLPEF
201: KKPNQKNENF SSEVNQNRRT TIAPPSSWAT FD

Arabidopsis Description

AGD15ARF-GAP domain 15 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR18]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.