CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15700	Soybean	cytosol	76.23	95.88
KRH38902	Soybean	cytosol	90.98	91.36
KRH41906	Soybean	cytosol	72.13	58.86
VIT_17s0053g00430.t01	Wine grape	cytosol	52.05	49.22
PGSC0003DMT400026308	Potato	cytosol, endoplasmic reticulum, nucleus	39.75	41.28
AT3G17660.2	Thale cress	nucleus	40.98	40.65
CDX92147	Canola	cytosol	42.21	40.55
CDX95838	Canola	cytosol	41.8	40.16
Solyc03g098500.2.1	Tomato	nucleus	39.34	38.71
Bra021263.1-P	Field mustard	cytosol	43.03	38.32
KRH27179	Soybean	cytosol	46.31	23.35
KRH22157	Soybean	cytosol	45.9	23.28
KRH26038	Soybean	cytosol	45.08	22.0
KRH55419	Soybean	cytosol	44.26	20.93
KRH30767	Soybean	nucleus	16.39	16.46
KRH75607	Soybean	cytosol	22.13	13.4
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	22.13	13.4
KRH67539	Soybean	mitochondrion	19.67	9.88
KRG95812	Soybean	endoplasmic reticulum	19.67	9.82
KRH32302	Soybean	mitochondrion	19.26	9.81
KRH19707	Soybean	cytosol	19.26	9.77
KRH63858	Soybean	cytosol	25.41	7.9
KRH45201	Soybean	cytosol	26.64	7.9
KRH59741	Soybean	cytosol	25.82	7.88
KRH01512	Soybean	cytosol	26.64	7.75
KRH29237	Soybean	cytosol	23.77	7.47
KRH24228	Soybean	cytosol	23.36	7.35
KRH54108	Soybean	cytosol	19.67	6.5

Protein Annotations

EntrezGene:100780727	MapMan:22.3.4.2	Gene3D:3.30.40.160	EMBL:ACUP02010276	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	EnsemblPlantsGene:GLYMA_16G215600	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164	InterPro:IPR038508	UniProt:K7MIZ2
EnsemblPlants:KRH09434	ProteinID:KRH09434	ProteinID:KRH09434.1	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115
PANTHER:PTHR23180	PANTHER:PTHR23180:SF160	SMART:SM00105	SUPFAM:SSF57863	UniParc:UPI000294908A	:

Description

hypothetical protein

Coordinates

chr16:+:37292073..37296192

Molecular Weight (calculated)

27495.5 Da

IEP (calculated)

10.071

GRAVY (calculated)

-0.666

Length

244 amino acids

Sequence
(BLAST)

001: MSGKASVSKE LHAKHTKILE GLVKLPDNRE CADCRTKAPR WASVNLGIFI CMQCSGIHRS LGVHISKVRS TTLDTWLPDQ VSFMQLIGNA KSNKHWEAEL
101: PPNFDRNGYG VEKFIRSKYV EKRWASKGGL QPASKSAEII FNSNESPAAR AKSATQRNRR LSLEESILVK HVAQIRPPVT RYHEGSSDFQ KNSPPPPLRK
201: PSASFDFDYT RGKNNGIVDH FDLFSIHDDK QDFSTTPPSW TTFD

Best Arabidopsis Sequence Match ( AT3G17660.1 )
(BLAST)

001: MNRKASVSKE LNAKHSKILE ALLKHPDNRE CADCRSKAPR WASVNLGIFI CMQCSGIHRS LGVHISQVRS ITLDTWLPDQ VAFMKSTGNA KGNEYWESEL
101: PQHFERSSSD TFIRAKYSEK RWVSPGAIQP APIVSQLSCK VSHLVESGYK PETPKKARTL SLDEEILLHH VLQVTPPETR TRAGSVDMKE NVYVVPLPEF
201: KKPNQKNENF SSEVNQNRRT TIAPPSSWAT FD

Arabidopsis Description

AGD15ARF-GAP domain 15 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR18]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.