CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32302	Soybean	mitochondrion	92.31	92.69
KRG95812	Soybean	endoplasmic reticulum	75.05	73.82
KRH67539	Soybean	mitochondrion	74.22	73.46
VIT_08s0007g00010.t01	Wine grape	mitochondrion	66.53	68.82
GSMUA_AchrUn_...	Banana	mitochondrion	57.8	65.57
Solyc09g010520.2.1	Tomato	nucleus	63.2	65.1
AT3G53710.2	Thale cress	cytosol	61.95	64.92
PGSC0003DMT400023046	Potato	mitochondrion	62.99	64.88
AT2G37550.1	Thale cress	mitochondrion	60.91	64.25
Solyc10g084690.1.1	Tomato	mitochondrion	59.46	62.31
PGSC0003DMT400028571	Potato	mitochondrion	59.46	62.31
GSMUA_Achr7P15230_001	Banana	cytosol	56.13	61.78
Os03t0278400-01	Rice	plasma membrane	57.17	60.71
GSMUA_Achr9P04020_001	Banana	mitochondrion	59.67	59.67
EER92462	Sorghum	mitochondrion	56.55	59.52
Zm00001d047793_P001	Maize	extracellular, plasma membrane	55.93	59.38
Zm00001d028656_P001	Maize	mitochondrion	55.72	59.03
Zm00001d007856_P001	Maize	cytosol	33.06	58.46
TraesCS4A01G099400.1	Wheat	mitochondrion	56.13	57.94
TraesCS4D01G205800.1	Wheat	mitochondrion	55.93	57.48
CDY23645	Canola	cytosol	19.33	57.41
GSMUA_Achr5P28610_001	Banana	endoplasmic reticulum, vacuole	54.05	57.14
TraesCS4B01G204900.1	Wheat	mitochondrion	55.09	57.11
GSMUA_Achr10P...	Banana	mitochondrion	46.57	56.42
CDY16083	Canola	cytosol	27.23	55.51
GSMUA_Achr7P10440_001	Banana	cytosol, plastid	43.87	53.28
CDY26647	Canola	plastid	19.96	53.04
Bra026910.1-P	Field mustard	plastid	19.96	53.04
HORVU4Hr1G059060.2	Barley	mitochondrion	56.55	47.22
KRH15700	Soybean	cytosol	9.36	23.2
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	18.5	22.08
KRH75607	Soybean	cytosol	18.5	22.08
KRH38902	Soybean	cytosol	9.98	19.75
KRH09434	Soybean	cytosol	9.77	19.26
KRH26038	Soybean	cytosol	17.67	17.0
KRH22157	Soybean	cytosol	16.63	16.63
KRH27179	Soybean	cytosol	16.22	16.12
KRH41906	Soybean	cytosol	9.98	16.05
KRH55419	Soybean	cytosol	17.05	15.89
KRH30767	Soybean	nucleus	6.24	12.35
KRH29237	Soybean	cytosol	13.31	8.25
KRH63858	Soybean	cytosol	13.31	8.15
KRH45201	Soybean	cytosol	13.93	8.14
KRH01512	Soybean	cytosol	13.93	7.99
KRH24228	Soybean	cytosol	12.68	7.86
KRH59741	Soybean	cytosol	12.89	7.75
KRH54108	Soybean	cytosol	11.43	7.45
Zm00001d032879_P001	Maize	extracellular	0.83	1.84

Protein Annotations

EntrezGene:100806519	MapMan:22.3.4.2	Gene3D:3.30.40.160	EMBL:ACUP02008197	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	EnsemblPlantsGene:GLYMA_13G131300	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	UniProt:I1LYU3	InterPro:IPR001164	InterPro:IPR038508
EnsemblPlants:KRH19707	ProteinID:KRH19707	ProteinID:KRH19707.1	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115
PANTHER:PTHR23180	PANTHER:PTHR23180:SF35	SMART:SM00105	SUPFAM:SSF57863	UniParc:UPI000233AAD3	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:24396788..24401422

Molecular Weight (calculated)

53230.6 Da

IEP (calculated)

7.628

GRAVY (calculated)

-1.062

Length

481 amino acids

Sequence
(BLAST)

001: MAAASRRLRD LQSEAGNKIC VDCSQKNPQW ASVSYGVFMC LECSGKHRGL GVHISFVRSV TMDSWSDIQI KKMEAGGNDK LNAFLAQYSI PKETDIVTKY
101: NTNAASVYRD RIQAIAEGRP WRDPPVLKEN LSAAGKGKPP LTQTRRNNNE GGWDDWGNEA SPRSKSKSTG DFRNLNGGGG APARSRSTED IYTRTQLEAS
201: AAKKEDFFAR KIAENESRPE GLPPSQGGKY VGFGSSPQPP QRRNEAQNDY FSVVSQGIGK LSLVAASAAN VVQAGTKEFT SKVKEGGYDH KVNETVNVVT
301: QKTSEIGQRT WGIMKGVMAM ASQKIEEYTK DDPNWKNDNW QRNENDRNGY YQDFNQENKG WNSSIGREQS SSGQFKTQSS SSWDDWDHND SRKEVPAKGS
401: SHSSGGLFST HNSSSWDDWE HRDSRKEEPA KGSAPHNNED WAGWDNAKDD GFDNYYEGAS NKKGVGHNGK SDGTWTEGGF L

Best Arabidopsis Sequence Match ( AT2G37550.1 )
(BLAST)

001: MAAARRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMDAGGNERL NNFLAQYGIS KETDIISKYN
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL

Arabidopsis Description

AGD7ADP-ribosylation factor GTPase-activating protein AGD7 [Source:UniProtKB/Swiss-Prot;Acc:O80925]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.