Factsheet for GSMUA_Achr10P26690_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 6
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P10440_001	Banana	cytosol, plastid	68.01	68.18
GSMUA_AchrUn_...	Banana	mitochondrion	58.44	54.72
Zm00001d007856_P001	Maize	cytosol	36.02	52.57
GSMUA_Achr7P15230_001	Banana	cytosol	57.43	52.17
Os03t0278400-01	Rice	plasma membrane	59.45	52.1
Zm00001d047793_P001	Maize	extracellular, plasma membrane	58.94	51.66
GSMUA_Achr9P04020_001	Banana	mitochondrion	61.71	50.94
TraesCS4A01G099400.1	Wheat	mitochondrion	59.45	50.64
EER92462	Sorghum	mitochondrion	58.19	50.55
TraesCS4B01G204900.1	Wheat	mitochondrion	58.94	50.43
TraesCS4D01G205800.1	Wheat	mitochondrion	59.45	50.43
Zm00001d028656_P001	Maize	mitochondrion	57.43	50.22
AT3G53710.2	Thale cress	cytosol	57.18	49.46
Solyc10g084690.1.1	Tomato	mitochondrion	56.93	49.24
PGSC0003DMT400028571	Potato	mitochondrion	56.68	49.02
GSMUA_Achr5P28610_001	Banana	endoplasmic reticulum, vacuole	55.92	48.79
AT2G37550.1	Thale cress	mitochondrion	54.41	47.37
KRH19707	Soybean	cytosol	56.42	46.57
Solyc09g010520.2.1	Tomato	nucleus	54.41	46.25
PGSC0003DMT400023046	Potato	mitochondrion	54.41	46.25
KRH32302	Soybean	mitochondrion	55.67	46.14
KRG95812	Soybean	endoplasmic reticulum	56.68	46.01
KRH67539	Soybean	mitochondrion	55.67	45.47
Bra026910.1-P	Field mustard	plastid	20.65	45.3
CDY26647	Canola	plastid	20.65	45.3
CDY23645	Canola	cytosol	17.88	43.83
CDY16083	Canola	cytosol	25.94	43.64
HORVU4Hr1G059060.2	Barley	mitochondrion	59.7	41.15
GSMUA_Achr2P18150_001	Banana	cytosol	21.41	21.04
GSMUA_Achr11P...	Banana	cytosol	20.91	20.65
GSMUA_Achr4P28870_001	Banana	cytosol	20.91	20.54
GSMUA_Achr4P21720_001	Banana	cytosol	19.4	18.97
GSMUA_Achr8P07470_001	Banana	cytosol	18.89	15.92
GSMUA_Achr1P08800_001	Banana	cytosol	18.64	15.48
GSMUA_Achr4P23780_001	Banana	cytosol	18.39	15.34
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	17.38	14.5
GSMUA_Achr5P26280_001	Banana	cytosol	16.62	13.98
GSMUA_Achr8P00550_001	Banana	cytosol	14.11	9.95
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	14.11	7.57
GSMUA_Achr11P...	Banana	cytosol	14.36	6.99
GSMUA_Achr4P00060_001	Banana	cytosol	14.61	6.93
GSMUA_Achr1P01960_001	Banana	cytosol	13.35	6.77
GSMUA_Achr7P22550_001	Banana	cytosol	1.26	3.94
GSMUA_Achr8P00540_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	1.01	1.56
Zm00001d032879_P001	Maize	extracellular	0.76	1.38

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	GO:GO:0003674
GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr10G26690_001	EnsemblPlants:GSMUA_Achr10P26690_001	EnsemblPlants:GSMUA_Achr10T26690_001	InterPro:IPR001164	InterPro:IPR038508	UniProt:M0RLP3
PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF35	SMART:SM00105
SUPFAM:SSF57863	UniParc:UPI00029538A5	SEG:seg	:	:	:

Description

Probable ADP-ribosylation factor GTPase-activating protein AGD6 [Source:GMGC_GENE;Acc:GSMUA_Achr10G26690_001]

Coordinates

chr10:-:30135272..30136732

Molecular Weight (calculated)

42696.4 Da

IEP (calculated)

6.519

GRAVY (calculated)

-0.760

Length

397 amino acids

Sequence
(BLAST)

001: MSSSSSSAAL RRLRALQSEP GNGTCVDCRQ RNPQWASVSY GVFICLECSG KHRGLGVHLS FVRSVTMDSW TEPQLRRMEC GGNDRLNAFL ARRGVHRGVN
101: VTAKYSSGAA AVYRDRIQAL AEGRPWKDPP VVKESTEPSA RKPPKSPSGR NQSVGDLQKG TGVGCETSLR SRSTEDLVTM SQHPGDKDCF FAMKMAENKA
201: RPEGIPPSQG GKYVGFGSSP TQPQRSASSQ DDLISVVSQG FGRLSMVAAS AAQSAANVVQ ASTKELTSKV MEAEVNGTVN TVATRTTEIG HRTWGIMKGV
301: MAMATQKVEE FAKEGMAWNE DDVGGHQEEI GQASKGGNSG QDHAPPAKPS WGDWEEEEEE EHGKQADGQE SWAGWDDTDD DEKESAAGKR SNQKASG

Best Arabidopsis Sequence Match ( AT3G53710.1 )
(BLAST)

001: MAATRQLRTL QSQPENKVCV DCAQKNPQWA SVSYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSAIQIK KMEAGGNERL NKFFAQYGIA KETDIISKYN
101: SNAASVYRDR IQALAEGRPW NDPPVVKEAN KKPPLAQGGY GNNNNNNNGG WDSWDNDDSY KSDMRRNQSA NDFRASGNRE GAHVKSKSSE DIYTRSQLEA
201: SAAGKESFFA RRMAENESKP EGLPPSQGGK YVGFGSSSAP PPRNNQQDDV FSVVSQGFGR LSLVAASAAQ SAASVVQTGT KEFTSKVKEG GYDHKVSETV
301: NVVANKTTEI GHRTWGIMKG VMAMATQKVE EFTKEGSTSW NQQSENEGNG YYQNFGNGNK AANSSVGGGR PQSSSTSGHY NNSQNSNSWD SWGENENKKT
401: EAVAPKGSSA SNDDDGWTGW DDHDAKDDGF DGHYQSAGDK KSAGHNGKSD TAWTGGGFL

Arabidopsis Description

AGD6Probable ADP-ribosylation factor GTPase-activating protein AGD6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M354]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.