Factsheet for GSMUA_Achr1P01960_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0632500-01	Rice	cytosol, plasma membrane	64.11	66.05
TraesCS6D01G213800.1	Wheat	cytosol	63.35	65.01
TraesCS6B01G259800.1	Wheat	cytosol	63.35	64.67
TraesCS6A01G221400.1	Wheat	cytosol	62.96	64.61
Zm00001d051188_P001	Maize	cytosol	10.09	59.85
HORVU6Hr1G059210.10	Barley	cytosol, plastid	54.02	59.75
KRH24228	Soybean	cytosol	58.88	59.41
KRH29237	Soybean	cytosol	58.62	59.15
OQU85359	Sorghum	cytosol, mitochondrion, plastid	63.09	58.88
Solyc04g008660.2.1	Tomato	cytosol	57.6	57.75
AT1G60860.1	Thale cress	cytosol	56.96	57.47
CDY40502	Canola	cytosol	55.81	57.27
GSMUA_Achr7P22550_001	Banana	cytosol	9.2	56.69
CDX97917	Canola	cytosol	55.43	56.44
Bra027124.1-P	Field mustard	cytosol	54.66	56.24
CDY54764	Canola	cytosol	54.66	56.17
Bra019896.1-P	Field mustard	cytosol	55.17	56.1
CDY19326	Canola	cytosol	55.04	56.05
AT1G10870.2	Thale cress	cytosol	55.43	55.64
GSMUA_Achr8P00540_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	18.01	54.86
Zm00001d051187_P009	Maize	plastid	49.04	54.47
PGSC0003DMT400076862	Potato	cytosol	8.81	53.49
VIT_01s0010g01480.t01	Wine grape	endoplasmic reticulum, extracellular	44.44	48.6
PGSC0003DMT400008126	Potato	cytosol	13.15	48.13
GSMUA_Achr11P...	Banana	cytosol	49.55	47.55
GSMUA_Achr4P00060_001	Banana	cytosol	49.3	46.12
PGSC0003DMT400013119	Potato	cytosol	12.13	45.67
GSMUA_Achr8P00550_001	Banana	cytosol	30.4	42.27
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	39.34	41.62
GSMUA_Achr4P23780_001	Banana	cytosol	9.45	15.55
GSMUA_Achr8P07470_001	Banana	cytosol	8.94	14.86
GSMUA_AchrUn_...	Banana	mitochondrion	7.79	14.39
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	8.56	14.08
GSMUA_Achr1P08800_001	Banana	cytosol	8.56	14.02
GSMUA_Achr5P26280_001	Banana	cytosol	8.43	13.98
GSMUA_Achr7P10440_001	Banana	cytosol, plastid	7.02	13.89
GSMUA_Achr5P28610_001	Banana	endoplasmic reticulum, vacuole	8.05	13.85
GSMUA_Achr2P18150_001	Banana	cytosol	7.02	13.61
GSMUA_Achr11P...	Banana	cytosol	6.9	13.43
GSMUA_Achr10P...	Banana	mitochondrion	6.77	13.35
GSMUA_Achr7P15230_001	Banana	cytosol	7.41	13.27
GSMUA_Achr4P21720_001	Banana	cytosol	6.77	13.05
GSMUA_Achr4P28870_001	Banana	cytosol	6.51	12.62
GSMUA_Achr9P04020_001	Banana	mitochondrion	7.66	12.47

Protein Annotations

Gene3D:1.20.1270.60	MapMan:22.3.4.1	Gene3D:3.30.40.160	InterPro:AGD1/2/3/4_BAR_plant	InterPro:AH/BAR_dom_sf	InterPro:ARFGAP/RecO
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	InterPro:BAR_dom
ncoils:Coil	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547
GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr1G01960_001	EnsemblPlants:GSMUA_Achr1P01960_001	EnsemblPlants:GSMUA_Achr1T01960_001	InterPro:IPR001164	InterPro:IPR001849
InterPro:IPR002110	InterPro:IPR004148	InterPro:IPR020683	InterPro:IPR027267	InterPro:IPR036770	InterPro:IPR038508
UniProt:M0RWA4	PFAM:PF00169	PFAM:PF01412	PFAM:PF12796	PFAM:PF16746	InterPro:PH_domain
PRINTS:PR00405	PFscan:PS50003	PFscan:PS50088	PFscan:PS50115	PFscan:PS50297	PANTHER:PTHR23180
PANTHER:PTHR23180:SF244	SMART:SM00105	SMART:SM00233	SMART:SM00248	SMART:SM00721	SUPFAM:SSF103657
SUPFAM:SSF48403	SUPFAM:SSF50729	SUPFAM:SSF57863	UniParc:UPI000295A65C	SEG:seg	:

Description

ADP-ribosylation factor GTPase-activating protein AGD4 [Source:GMGC_GENE;Acc:GSMUA_Achr1G01960_001]

Coordinates

chr1:+:1595206..1607640

Molecular Weight (calculated)

88409.6 Da

IEP (calculated)

6.470

GRAVY (calculated)

-0.318

Length

783 amino acids

Sequence
(BLAST)

001: MTAFVTLEDS PMFRKQIYSL EQTTDELKDR CHKFHKGCKR FMVSLGEAYY GDLSFADSLE AFGAGQDDPV SVAIGGPVMS KFTTAFRELG SYKELLRSQV
101: EHMLSNRLMQ FMNVDLQNVK DCRRRFDKAT AGYDQAREKF MSLKKGTRVD IVAELEEASF LYECAFERCR FNLVNALANI EAKKKFEFLE SISAVMDANM
201: RYFKQGYELL SQMEPFIHQV LTYTQQSKEM INVEQDKLEK RIQEFRTQSE LANLRSSSNM QATTSGDGIN VIGLNSYKNI EALMQSTANG EVQIIKQGYL
301: LKRSSNLRGD WKRRFFVLDS HGTLYYYRDK WSKQPLSCIG LHNKMLLSLE MYPEVAWKLR SLKHTSFQGG ENIGFHTVDL RTSTIKIDAE QTDLRFCFRI
401: ISPAKTFTLQ AENEVDRMDW VEKIRGVITS LLNSTLSNQL SSGGLDMDSH SFADANGVDA HLLEESTNTK GYDNISKILR SIPGNDACAE CGAPDPDWAS
501: LNLGILVCIE CSGVHRNLGV HISKVRSLTL DVKVWEPAVV DLFCALGNAY CNSVWEELLL FQDQRIDVPN VDGPSVKKPT PKDAISRKEK YIHSKYVGKS
601: LIVRETSQSE LPLITVRIWE AIKTNNVQIA YRLFVASDAF PNTIYDEVNS ELYHISDTPV NRNNGSTERK QFDPALCQKI KDSGEPESCL DGCSLLHIAC
701: HVGDPVMLEL LLQFGADINF QDFHGRTPLH HCICTKNNSL AKYLIRRGAS TSAKDGGGFT ALERAMELGA ITDEELFILL AGR

Best Arabidopsis Sequence Match ( AT1G10870.1 )
(BLAST)

001: MATFINLEDS PMFQKQVCSL EGTADELKDR CQKLYKGVKK FMGTLGEASK GESAFAACLE EFGGGPDDPI SLSIGGPVIS KFINALRELA SYKEFLCSQV
101: EHVLLERLMN FISVDLQEAK ESRHRFDKAA HSYDQSREKF VSLKKNTRGE IVAELEEDLE NSKSTFEKSR FNLVNSLMTI EAKKKYEFLE SISAIMDAHL
201: RYFKLGYDLL NQLEPFIHQI LTYAQQSKEQ SKIEQDRLAR RIQEFRTQSE LDSQQLVANA ESSGANGNRV GGNIPYKNTE TSLTADKEVI KQGYLLKRSS
301: SLRTDWKRKF FVLDSHGSMY YYRTNGNKSM GSHHHYSGSS DHNTGVFGRF RARHNRSGSL TEGSLGYNTI DLRTSLIKLD AEDMDLRLCF RIISPQKTYT
401: LQAENGADRM DWVNKITKAI GTLLNSHFLQ QSPVRYLDKD NSSSAPANAV VSGDQIRHND SRQNIGDDVS TILRGLPGNN ACAECNAPEP DWASLNLGVL
501: LCIQCSGVHR NLGVHISKVR SLSLDVKVWE PTILDLFRNL GNVYCNSLWE GLLHLDDDCE DGSALSHASV SKPCPEDSFS VKEKYILGKY LEKALVIKDE
601: SEANLSAASR IWEAVQSRNI REIYRLIVTT GDVNIINTKF DDITDIDAYH HIDAAEKAVK KRHDPTVCQR IKESNEPRSC LQGCSLLHVA CHIGDSVLLE
701: LLLQFGADLN IRDYHGRTPL HHCISSGNHK FAKILLRRGA RPSIEDDGGL SVLERAMEMG AITDEELFLL LAECA

Arabidopsis Description

AGD4ARF-GAP domain 4 [Source:TAIR;Acc:AT1G10870]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.