Factsheet for Os02t0632500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G213800.1	Wheat	cytosol	87.11	86.76
TraesCS6A01G221400.1	Wheat	cytosol	86.71	86.37
TraesCS6B01G259800.1	Wheat	cytosol	86.71	85.92
Zm00001d051188_P001	Maize	cytosol	14.21	81.82
HORVU6Hr1G059210.10	Barley	cytosol, plastid	74.87	80.37
OQU85359	Sorghum	cytosol, mitochondrion, plastid	85.79	77.71
GSMUA_Achr1P01960_001	Banana	cytosol	66.05	64.11
Solyc04g008660.2.1	Tomato	cytosol	56.18	54.67
CDY19326	Canola	cytosol	54.74	54.1
CDY40502	Canola	cytosol	54.21	54.0
KRH29237	Soybean	cytosol	55.13	53.99
Bra019896.1-P	Field mustard	cytosol	54.61	53.9
KRH24228	Soybean	cytosol	54.87	53.74
CDX97917	Canola	cytosol	54.34	53.71
AT1G60860.1	Thale cress	cytosol	54.74	53.61
PGSC0003DMT400076862	Potato	cytosol	8.95	52.71
Bra027124.1-P	Field mustard	cytosol	52.76	52.69
CDY54764	Canola	cytosol	52.76	52.62
AT1G10870.2	Thale cress	cytosol	53.82	52.44
VIT_01s0010g01480.t01	Wine grape	endoplasmic reticulum, extracellular	44.21	46.93
PGSC0003DMT400008126	Potato	cytosol	12.24	43.46
Os09t0510700-01	Rice	cytosol	47.5	43.18
Os08t0537600-01	Rice	plasma membrane	47.11	43.08
PGSC0003DMT400013119	Potato	cytosol	11.18	40.87
Os07t0563800-02	Rice	cytosol	10.53	16.81
Os10t0574800-01	Rice	plasma membrane	6.84	12.78
Os03t0278400-01	Rice	plasma membrane	6.58	11.04
Os03t0854100-01	Rice	cytosol	5.79	10.68

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:1.25.40.20	MapMan:22.3.4.1	Gene3D:3.30.40.160	EntrezGene:4330061	InterPro:AGD1/2/3/4_BAR_plant
InterPro:AH/BAR_dom_sf	InterPro:ARFGAP/RecO	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	ProteinID:BAD25291.1	ProteinID:BAD26487.1	ProteinID:BAF09417.1	InterPro:BAR_dom	ProteinID:BAS79912.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547
GO:GO:0046872	InterPro:IPR001164	InterPro:IPR001849	InterPro:IPR002110	InterPro:IPR004148	InterPro:IPR020683
InterPro:IPR027267	InterPro:IPR036770	InterPro:IPR038508	EnsemblPlantsGene:Os02g0632500	EnsemblPlants:Os02t0632500-01	PFAM:PF00169
PFAM:PF01412	PFAM:PF12796	PFAM:PF16746	InterPro:PH_domain	PRINTS:PR00405	PFscan:PS50003
PFscan:PS50088	PFscan:PS50115	PFscan:PS50297	PANTHER:PTHR23180	PANTHER:PTHR23180:SF244	UniProt:Q6H462
SMART:SM00105	SMART:SM00233	SMART:SM00248	SMART:SM00721	SUPFAM:SSF103657	SUPFAM:SSF48403
SUPFAM:SSF50729	SUPFAM:SSF57863	UniParc:UPI00003B43FD	RefSeq:XP_015625922.1	SEG:seg	:

Description

Arf GTPase activating protein family protein. (Os02t0632500-01)

Coordinates

chr2:+:25329183..25341924

Molecular Weight (calculated)

85646.8 Da

IEP (calculated)

6.286

GRAVY (calculated)

-0.426

Length

760 amino acids

Sequence
(BLAST)

001: MAAFTKLEDS PMFRKQVNSM EQLSDELKQR CSNLHKGCKR FMGSLDEGYA GDLTFADALE AFGAGQDDPV SVAIGGPVMS KFTTAFRELG TYKELLRSQV
101: DHMLSERLMQ FIDVDLHGVK DCRQRLDRAT VGYDQAREKF VSVRKGTRAE VVTGLEEDLH NAKSAFERCR FNLVHALSNI EAKKKYEFLE SISAVMDAHL
201: RYFKQGYELL SQMEPFIHQV LTYAQQSKEM AINEQDKLAK RIQEYRTQEE IANLRMASNV DTSTSGDGIH VVGLQSYKKI EALMQSTANG EVQIIKQGYL
301: FKRSENSREW KRRFFVLDSH GTLFYYGNKG QSQGAASQQT AGEGTGVFSR FRFLNQKAPT QGDNALSCHK IDLRTSTIKI DAEENDLRFC FRVISPMKAY
401: TLQAESGADQ KDWIEKVTGV IASLLNLPFP RQVSYGNLEA EHHGSANSVD SLSLEENKSP EGHDDIFNHL RNIPGNDSCA ECRSPDPDWA SLNLGILICI
501: ECSGAHRNLG VHISKVRSLR LDVKVWEPVI MDLFHELGND YTNSIWEAML PKEDQGINEF NDAILFIEKP KPTDAFSIKE RYIQTKYVDK LLIAKDTNQI
601: TIDILEAVRT NDVRAAYRIL VLADVSPNMI YDELNNDVHH DPSVTDGKLF DPASCDVKDD SGKPEGCLQG CSLLHIACQY GHSIMAELLL LFGADINKQD
701: FHGRTPLHHC VRRKNDALTK HLLKRGARTT IKDGGGLTAL ERRMELGAIT DEDLFILFVR

Best Arabidopsis Sequence Match ( AT1G60860.1 )
(BLAST)

001: MAGFINLEDS PMFQKQVFSL EGTSDELKDR CQKLYKGVKK FMGALGEAST GVSAFADSLE EFGAGHDDPV SVSIGGPVIS KFINTLRELS SYKEFLRSQV
101: EHVLLERLTN FMTVDLQEAK ESRRRFDKAV HSYDQAREKF VSLKKNTRGD IVAELEEDLE NSKSAFEKSR FNLVNSLMTI EAKKKYEFLE SISAIMDSHF
201: KYFKLGYDLL SQLEPYIHQV LTYAQQSKEQ SKIEQDRFAQ RIQEFRTQSE LDSQQASAKA DPSDVGGNHV YRAIPRKNVE ANSVSTADKE VTKQGYLLKR
301: SASLRADWKR RFFVLDNHGS LYYYRNTGNK SAKSQHYYSG LGEHSSGVFG RFRTRHNRSA SQGSLDCNMI DLRTSLIKLD AEDTDLRLCF RIISPQKTYT
401: LQAENGADRM DWVNKITAAI TIRLNSHFLQ QSPARYLDKK NTSSGPATEN LTLNQKEDYN QRLNVGDDVL TILREIPGNN TCAECNAPDP DWASLNLGVL
501: MCIECSGVHR NLGVHISKVR SLTLDVKVWE PTILDLFRNL GNGYCNSVWE ELLHHLDDDS EKGSTDTLAS VSKPSSEDWF TLKEKYINGK YLEKALVVKD
601: EREANSTASS RIWEAVQSRN IRDIYRLIVK ADANIINTKF DDITDLDVYH HHHVDAPDEV KKRHDPNACQ RIKNSNEARN CLQGCSLLHV ACQSGDPILL
701: ELLLQFGADI NMRDYHGRTP LHHCIASGNN AFAKVLLRRG ARPSIEDGGG LSVLERAMEM GAITDEELFL LLAECQ

Arabidopsis Description

AGD2ADP-ribosylation factor GTPase-activating protein AGD2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6C3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.