Factsheet for Os03t0278400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 4
golgi 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92462	Sorghum	mitochondrion	88.52	87.75
Zm00001d028656_P001	Maize	mitochondrion	87.64	87.44
Zm00001d047793_P001	Maize	extracellular, plasma membrane	85.65	85.65
TraesCS4D01G205800.1	Wheat	mitochondrion	86.31	83.55
TraesCS4B01G204900.1	Wheat	mitochondrion	85.43	83.41
TraesCS4A01G099400.1	Wheat	mitochondrion	85.65	83.26
HORVU4Hr1G059060.2	Barley	mitochondrion	85.65	67.36
AT3G53710.2	Thale cress	cytosol	61.81	61.0
AT2G37550.1	Thale cress	mitochondrion	60.04	59.65
GSMUA_Achr10P...	Banana	mitochondrion	52.1	59.45
KRH67539	Soybean	mitochondrion	62.91	58.64
Solyc10g084690.1.1	Tomato	mitochondrion	59.38	58.61
Solyc09g010520.2.1	Tomato	nucleus	60.26	58.46
PGSC0003DMT400023046	Potato	mitochondrion	60.26	58.46
PGSC0003DMT400028571	Potato	mitochondrion	59.16	58.39
KRG95812	Soybean	endoplasmic reticulum	62.69	58.08
KRH32302	Soybean	mitochondrion	60.93	57.62
KRH19707	Soybean	cytosol	60.71	57.17
GSMUA_Achr7P10440_001	Banana	cytosol, plastid	49.23	56.31
CDY23645	Canola	cytosol	19.87	55.56
CDY16083	Canola	cytosol	28.48	54.66
CDY26647	Canola	plastid	20.09	50.28
Bra026910.1-P	Field mustard	plastid	20.09	50.28
VIT_00s0250g00050.t01	Wine grape	plastid	45.03	47.55
Os10t0574800-01	Rice	plasma membrane	19.43	21.62
Os03t0854100-01	Rice	cytosol	18.98	20.87
Os07t0563800-02	Rice	cytosol	17.66	16.81
Os09t0510700-01	Rice	cytosol	14.79	8.01
Os08t0537600-01	Rice	plasma membrane	14.13	7.7
Os02t0632500-01	Rice	cytosol, plasma membrane	11.04	6.58

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	EntrezGene:4332427	ProteinID:ABF95284.1	EMBL:AK070052	InterPro:ARFGAP/RecO
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	ProteinID:BAF11640.1	ProteinID:BAS83543.1	ProteinID:EAZ26458.1	GO:GO:0003674
GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872
InterPro:IPR001164	InterPro:IPR038508	EnsemblPlantsGene:Os03g0278400	EnsemblPlants:Os03t0278400-01	PFAM:PF01412	PRINTS:PR00405
PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF35	UniProt:Q10N88	SMART:SM00105	SUPFAM:SSF57863
UniParc:UPI0000DB41B5	RefSeq:XP_015632454.1	SEG:seg	:	:	:

Description

Similar to ADP ribosylation GTPase-like protein (Fragment). (Os03t0278400-01)

Coordinates

chr3:-:9455580..9458843

Molecular Weight (calculated)

48885.8 Da

IEP (calculated)

7.119

GRAVY (calculated)

-0.924

Length

453 amino acids

Sequence
(BLAST)

001: MASTAARRLR ELQGQAGNKT CVDCAQRNPQ WASVSYGVFM CLECSGKHRG LGVHISFVRS VTMDSWTEAQ LRKMEAGGND RLNAFLAARG VPKETPHVAK
101: YNSNAAAAYR DRIVAVAEGR PWTDPPVVKE TPGSGAPAPT RKPPLPAGGG GGGGGGWDDW DDDFRPDMRR NQSVGSFGES GAESGRQPPR SKSTQDMYTR
201: QQLEASAANK DSFFARRMAE NESKPEGIPP SQGGKYVGFG SSPAPSANRN GAAAQGDVMQ VVSQGIGRLS LVAASAAQSA ASVVQVGTKE FQSKMREGGY
301: DQKVNETVNV VANKTAEIGS RTWGIMKGVM ALASQKVEEY AKEGGNGWGD DWQRREQGSE PYHRFERETN GNGWNSSSHD GSSKNYNSNS WDDWDEPVKK
401: DEPAKERQSS DSWAGWDDGK DDNFDSYNHS TPSKGSNQNG TTGGSYWTEG GFR

Best Arabidopsis Sequence Match ( AT2G37550.1 )
(BLAST)

001: MAAARRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMDAGGNERL NNFLAQYGIS KETDIISKYN
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL

Arabidopsis Description

AGD7ADP-ribosylation factor GTPase-activating protein AGD7 [Source:UniProtKB/Swiss-Prot;Acc:O80925]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.