Factsheet for Zm00001d051187_P009

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G059210.10	Barley	cytosol, plastid	66.38	66.1
OQU85359	Sorghum	cytosol, mitochondrion, plastid	76.88	64.6
TraesCS6D01G213800.1	Wheat	cytosol	67.66	62.52
TraesCS6A01G221400.1	Wheat	cytosol	67.23	62.12
TraesCS6B01G259800.1	Wheat	cytosol	67.09	61.67
GSMUA_Achr1P01960_001	Banana	cytosol	54.47	49.04
Zm00001d049872_P001	Maize	cytosol	37.87	48.63
PGSC0003DMT400076862	Potato	cytosol	8.65	47.29
VIT_01s0010g01480.t01	Wine grape	endoplasmic reticulum, extracellular	47.52	46.79
Zm00001d009353_P001	Maize	cytosol	7.94	46.28
KRH24228	Soybean	cytosol	49.22	44.72
KRH29237	Soybean	cytosol	49.22	44.72
Solyc04g008660.2.1	Tomato	cytosol	49.08	44.3
CDY19326	Canola	cytosol	47.94	43.95
Bra019896.1-P	Field mustard	cytosol	47.94	43.9
CDX97917	Canola	cytosol	47.8	43.82
AT1G60860.1	Thale cress	cytosol	47.66	43.3
CDY40502	Canola	cytosol	46.52	42.99
AT1G10870.2	Thale cress	cytosol	47.23	42.69
Bra027124.1-P	Field mustard	cytosol	45.67	42.31
CDY54764	Canola	cytosol	45.67	42.26
Zm00001d015981_P001	Maize	peroxisome	9.08	41.83
PGSC0003DMT400008126	Potato	cytosol	12.2	40.19
Zm00001d015278_P001	Maize	mitochondrion	18.58	38.99
Zm00001d016932_P001	Maize	endoplasmic reticulum	9.93	38.25
Zm00001d021087_P003	Maize	cytosol	44.26	37.28
Zm00001d031462_P001	Maize	endoplasmic reticulum, extracellular	10.07	37.17
Zm00001d031667_P006	Maize	cytosol	42.98	36.82
Zm00001d004245_P003	Maize	cytosol	9.08	33.33
PGSC0003DMT400013119	Potato	cytosol	9.36	31.73
Zm00001d032879_P001	Maize	extracellular	7.52	24.42
Zm00001d023982_P001	Maize	cytosol	13.48	24.42
Zm00001d021802_P001	Maize	cytosol	8.51	12.53
Zm00001d006602_P001	Maize	cytosol	8.37	11.9
Zm00001d046873_P001	Maize	cytosol, plastid	8.09	10.71
Zm00001d016547_P001	Maize	cytosol, plastid	8.09	10.71
Zm00001d051030_P001	Maize	cytosol, plastid	8.09	10.71
Zm00001d028656_P001	Maize	mitochondrion	6.52	10.13
Zm00001d007856_P001	Maize	cytosol	3.83	9.93
Zm00001d047793_P001	Maize	extracellular, plasma membrane	6.24	9.71
Zm00001d012827_P002	Maize	cytosol	5.67	9.5
Zm00001d034885_P002	Maize	cytosol	5.53	9.38
Zm00001d030031_P002	Maize	plastid	6.24	9.11
Zm00001d051188_P001	Maize	cytosol	1.7	9.09
Zm00001d047020_P002	Maize	cytosol	5.39	8.64
Zm00001d049871_P001	Maize	cytosol	1.56	5.76

Protein Annotations

MapMan:22.3.4.1	Gene3D:3.30.40.160	UniProt:A0A1D6Q5I5	InterPro:AH/BAR_dom_sf	ProteinID:AQK53791.1	InterPro:ARFGAP/RecO
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	InterPro:BAR_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005096
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872
InterPro:IPR001164	InterPro:IPR001849	InterPro:IPR004148	InterPro:IPR027267	InterPro:IPR038508	PFAM:PF00169
PFAM:PF01412	PFAM:PF16746	InterPro:PH_domain	PRINTS:PR00405	PFscan:PS50003	PFscan:PS50115
PANTHER:PTHR23180	PANTHER:PTHR23180:SF244	SMART:SM00105	SMART:SM00233	SMART:SM00721	SUPFAM:SSF103657
SUPFAM:SSF50729	SUPFAM:SSF57863	TMHMM:TMhelix	UniParc:UPI000842D82F	EnsemblPlantsGene:Zm00001d051187	EnsemblPlants:Zm00001d051187_P009
EnsemblPlants:Zm00001d051187_T009	:	:	:	:	:

Description

ADP-ribosylation factor GTPase-activating protein AGD2

Coordinates

chr4:+:147806220..147820382

Molecular Weight (calculated)

79103.2 Da

IEP (calculated)

6.431

GRAVY (calculated)

-0.187

Length

705 amino acids

Sequence
(BLAST)

001: MATFTKLEDS PMFRKQVASL ALRSSAHEAS LIRPRRGNVS CFLGSRFLVL VFVMFHELVL FYYVANYLSF RGSLDEAYAG DLSFADSLQA FGAGLDDPIS
101: VAIGGPVMSK FTTAFRELGT YKELLRSQLE HMLSDRLSQF INVDLNGVKD CRQRLDRAAV AYDQAREKFV SVRKGTRAEV VTELEEARCE LVMSLFFRFC
201: FILIYGVDEC IYSFHVVALI LSLQDLHNAK SAFERCRFNL VHALANIEAK KKYEFLESIS AVMDAHLRYF KQGYELLSQM EPFIHQVLTY AQQSKQMALS
301: DQDKLAKRIQ EFRTEEEIAN VRMASNVDTS TSGDGIHVVG LQSYKTIEAL MQSTANGEVQ VIKQGYLFKR PQNIRGEWKR RFFVLDSHGT LYYYGNKGKS
401: QGVSSQQTTE GTGVFGRFRF LNQRVSSQSE DSLSCHRIDL RTSTIKIDAD ENDLRFCFRI ISPVKAYTLQ AESGADQKDW IQKITGVIAS LLNSPFPQQL
501: SYGNVAAESN RSTSSVDSLS IEDNKSSEGH DDIFNLLRNI PGNDSCAECR SPDPDWASLN LGILICIECS GAHRNLGVHI SKVRSLRLDV KVWEPVIMDL
601: FHALGNDYAN SIWEALLPKE DQGRGSWVSC HPSLFHGSTC KENEFHGLSI IDKYNSVGAT FPEIPIAEIP MAATQIHHIA PSEVMAELLL ASRPEDEAGP
701: SRSAV

Best Arabidopsis Sequence Match ( AT1G10870.1 )
(BLAST)

001: MATFINLEDS PMFQKQVCSL EGTADELKDR CQKLYKGVKK FMGTLGEASK GESAFAACLE EFGGGPDDPI SLSIGGPVIS KFINALRELA SYKEFLCSQV
101: EHVLLERLMN FISVDLQEAK ESRHRFDKAA HSYDQSREKF VSLKKNTRGE IVAELEEDLE NSKSTFEKSR FNLVNSLMTI EAKKKYEFLE SISAIMDAHL
201: RYFKLGYDLL NQLEPFIHQI LTYAQQSKEQ SKIEQDRLAR RIQEFRTQSE LDSQQLVANA ESSGANGNRV GGNIPYKNTE TSLTADKEVI KQGYLLKRSS
301: SLRTDWKRKF FVLDSHGSMY YYRTNGNKSM GSHHHYSGSS DHNTGVFGRF RARHNRSGSL TEGSLGYNTI DLRTSLIKLD AEDMDLRLCF RIISPQKTYT
401: LQAENGADRM DWVNKITKAI GTLLNSHFLQ QSPVRYLDKD NSSSAPANAV VSGDQIRHND SRQNIGDDVS TILRGLPGNN ACAECNAPEP DWASLNLGVL
501: LCIQCSGVHR NLGVHISKVR SLSLDVKVWE PTILDLFRNL GNVYCNSLWE GLLHLDDDCE DGSALSHASV SKPCPEDSFS VKEKYILGKY LEKALVIKDE
601: SEANLSAASR IWEAVQSRNI REIYRLIVTT GDVNIINTKF DDITDIDAYH HIDAAEKAVK KRHDPTVCQR IKESNEPRSC LQGCSLLHVA CHIGDSVLLE
701: LLLQFGADLN IRDYHGRTPL HHCISSGNHK FAKILLRRGA RPSIEDDGGL SVLERAMEMG AITDEELFLL LAECA

Arabidopsis Description

AGD4ARF-GAP domain 4 [Source:TAIR;Acc:AT1G10870]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.