Factsheet for Zm00001d006602_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99548	Sorghum	cytosol	88.71	93.02
Zm00001d021802_P001	Maize	cytosol	84.48	87.47
CDY71222	Canola	cytosol	16.33	84.38
Os07t0563800-02	Rice	cytosol	75.6	78.78
TraesCS2D01G212100.1	Wheat	cytosol	71.98	75.16
TraesCS2A01G203600.1	Wheat	cytosol	71.57	74.74
TraesCS2B01G230900.1	Wheat	cytosol	71.37	74.53
GSMUA_Achr4P23780_001	Banana	cytosol	50.0	52.1
GSMUA_Achr1P08800_001	Banana	cytosol	50.2	52.09
VIT_00s0404g00040.t01	Wine grape	cytosol	48.19	47.14
Zm00001d046873_P001	Maize	cytosol, plastid	43.15	40.23
Zm00001d051030_P001	Maize	cytosol, plastid	43.15	40.23
Zm00001d016547_P001	Maize	cytosol, plastid	42.94	40.04
PGSC0003DMT400012918	Potato	cytosol	34.07	36.34
Solyc03g006610.2.1	Tomato	cytosol	34.07	36.27
Zm00001d009353_P001	Maize	cytosol	7.26	29.75
Zm00001d015981_P001	Maize	peroxisome	8.87	28.76
Zm00001d004245_P003	Maize	cytosol	10.08	26.04
Zm00001d034885_P002	Maize	cytosol	17.54	20.91
Zm00001d012827_P002	Maize	cytosol	17.54	20.67
Zm00001d047020_P002	Maize	cytosol	16.73	18.86
Zm00001d007856_P001	Maize	cytosol	10.28	18.75
Zm00001d028656_P001	Maize	mitochondrion	15.73	17.18
Zm00001d047793_P001	Maize	extracellular, plasma membrane	15.32	16.78
Zm00001d049871_P001	Maize	cytosol	6.25	16.23
Zm00001d030031_P002	Maize	plastid	15.52	15.94
Zm00001d051188_P001	Maize	cytosol	4.23	15.91
Zm00001d015278_P001	Maize	mitochondrion	9.88	14.58
Zm00001d021087_P003	Maize	cytosol	19.35	11.47
Zm00001d031667_P006	Maize	cytosol	18.75	11.3
Zm00001d023982_P001	Maize	cytosol	8.27	10.54
Zm00001d049872_P001	Maize	cytosol	11.29	10.2
Zm00001d051187_P009	Maize	plastid	11.9	8.37
Zm00001d016932_P001	Maize	endoplasmic reticulum	0.81	2.19
Zm00001d031462_P001	Maize	endoplasmic reticulum, extracellular	0.81	2.09
Zm00001d032879_P001	Maize	extracellular	0.6	1.38

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	UniProt:A0A1D6EYB4	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547
GO:GO:0046872	InterPro:IPR001164	InterPro:IPR038508	ProteinID:ONM24383.1	PFAM:PF01412	PRINTS:PR00405
PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF160	SMART:SM00105	SUPFAM:SSF57863	UniParc:UPI0008442707
EnsemblPlantsGene:Zm00001d006602	EnsemblPlants:Zm00001d006602_P001	EnsemblPlants:Zm00001d006602_T001	SEG:seg	:	:

Description

Probable ADP-ribosylation factor GTPase-activating protein AGD5

Coordinates

chr2:-:211852650..211857224

Molecular Weight (calculated)

53262.4 Da

IEP (calculated)

8.386

GRAVY (calculated)

-0.585

Length

496 amino acids

Sequence
(BLAST)

001: MNEKASVSKE LNAKHKKILE GLLRLPENRE CADCKSKGPR WASVNLGIFI CMTCSGIHRS LGVHISKVRS ATLDTWLPEQ VAFIQSMGNE KANSHWEAEL
101: PPNYDRVGIE NFIRAKYEDK RWVPRNGTLR PSSGVRDDKS QESPASANRS GHHRSSFEQN RASPALPSKV APVASRIPSQ VILCYQSFPK QQSICQCETG
201: RCQASPQPPK VEPPVPKVVS PPQPQKSPAK VEATPPKVEK PSVAPPPKVD YATDLFNMLS MDGTTEKESE SSPNDDNAWD GFQSAQPVPS SEEKDSAKPA
301: ESMTQSTPGI EDLFKDSPVV SLSSAPAVSQ VNAKNDIMSL FEKSNMASPF AVQQQQLAFM SQQQALLMAA LKAGNSPQIV PGNANQLNTN VSNPPLGTLP
401: FQNWTNLGYQ NPGLTLAAAQ NGATKVSNNN QDLSSGTFGF GTPGMHNITP AVPANGATAA GASNNGTAST ASSTLPSQSG KDYDFSSLTQ GFFTKR

Best Arabidopsis Sequence Match ( AT5G54310.1 )
(BLAST)

001: MNEKANVSKE LNARHRKILE GLLKHPENRE CADCKTKGPR WASVNLGIFI CMQCSGIHRS LGVHISKVRS ATLDTWLPEQ VAFIQSMGND KANSYWEAEL
101: PPNYDRVGIE NFIRAKYEEK RWVSRGEKAR SPPRVEQERR KSVERSGPGY EHGHSSSPVN LFEERKTIPA SRTRNNVAAT RINLPVPPQG PSQVIKPQQK
201: MESAATPVER EKQAVNVAPA SDPPKVDFAT DLFNMLSMDD STTNTSEATP GDTPADDNSW AGFQSAGSGQ TAEKIVTAKP AESSSPPASS SDFEDLFKDT
301: PNLTTQQAPK DVKGDIMSLF EKTNIVSPFA MHQQQVAMLA QQQALYMAAA KAAGGTPNGV NQQAIANALN VASANWSNPG GYQIPGMTNP VGGQADLQKL
401: MQNMNMNANM NTRPAQPQEN TLQYPSSSFY TMGQANQVNG MTPNSTGKPQ SSSATQPTST TPSSQSGKDF DFSSLMDGMF TKH

Arabidopsis Description

AGD5Nevershed [Source:UniProtKB/TrEMBL;Acc:C4NZX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.