Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015981_P001 | Maize | peroxisome | 75.52 | 94.77 |
| Zm00001d009353_P001 | Maize | cytosol | 57.81 | 91.74 |
| Zm00001d023982_P001 | Maize | cytosol | 65.62 | 32.39 |
| Zm00001d049872_P001 | Maize | cytosol | 81.25 | 28.42 |
| Zm00001d015278_P001 | Maize | mitochondrion | 46.88 | 26.79 |
| Zm00001d031667_P006 | Maize | cytosol | 85.42 | 19.93 |
| OQU80812 | Sorghum | cytosol | 84.9 | 19.78 |
| TraesCS7A01G263800.2 | Wheat | cytosol | 70.31 | 16.4 |
| HORVU7Hr1G055220.21 | Barley | cytosol | 69.79 | 16.13 |
| Os08t0537600-01 | Rice | plasma membrane | 69.79 | 16.13 |
| TraesCS7D01G264700.1 | Wheat | endoplasmic reticulum | 70.83 | 16.06 |
| TraesCS7B01G161800.1 | Wheat | endoplasmic reticulum | 70.83 | 16.06 |
| Solyc12g042170.1.1 | Tomato | cytosol | 44.27 | 15.68 |
| GSMUA_Achr7P22530_001 | Banana | endoplasmic reticulum | 56.77 | 14.73 |
| Zm00001d021087_P003 | Maize | cytosol | 60.94 | 13.98 |
| PGSC0003DMT400036762 | Potato | cytosol | 42.19 | 13.87 |
| GSMUA_Achr11P... | Banana | cytosol | 55.73 | 13.11 |
| GSMUA_Achr4P00060_001 | Banana | cytosol | 56.25 | 12.9 |
| CDX86943 | Canola | cytosol | 45.83 | 12.36 |
| PGSC0003DMT400005756 | Potato | cytosol | 51.56 | 12.12 |
| Solyc05g023750.2.1 | Tomato | cytosol | 51.04 | 12.0 |
| CDY53619 | Canola | cytosol | 20.83 | 11.87 |
| VIT_01s0150g00030.t01 | Wine grape | cytosol | 50.52 | 11.66 |
| Bra010046.1-P | Field mustard | cytosol | 47.4 | 11.5 |
| CDY00242 | Canola | cytosol | 46.88 | 11.44 |
| KRH45201 | Soybean | cytosol | 48.96 | 11.42 |
| Bra008838.1-P | Field mustard | cytosol | 48.96 | 11.38 |
| CDX69650 | Canola | cytosol | 48.96 | 11.38 |
| KRH01512 | Soybean | cytosol | 49.48 | 11.32 |
| KRH63858 | Soybean | cytosol | 45.83 | 11.21 |
| KRH59741 | Soybean | cytosol | 46.35 | 11.12 |
| VIT_17s0000g00310.t01 | Wine grape | cytosol | 47.92 | 11.12 |
| AT5G13300.1 | Thale cress | cytosol | 47.92 | 11.12 |
| AT5G61980.1 | Thale cress | cytosol | 47.92 | 11.11 |
| Zm00001d032879_P001 | Maize | extracellular | 12.5 | 11.06 |
| Bra006193.1-P | Field mustard | cytosol | 46.35 | 10.95 |
| CDY09784 | Canola | cytosol | 45.31 | 10.9 |
| CDX78515 | Canola | cytosol | 46.88 | 10.83 |
| CDY30689 | Canola | cytosol | 47.92 | 10.67 |
| Bra029295.1-P | Field mustard | cytosol | 47.92 | 10.67 |
| Zm00001d021802_P001 | Maize | cytosol | 26.56 | 10.65 |
| Zm00001d006602_P001 | Maize | cytosol | 26.04 | 10.08 |
| Solyc03g118260.1.1 | Tomato | cytosol | 41.67 | 10.0 |
| KRH54108 | Soybean | cytosol | 36.46 | 9.49 |
| CDX70496 | Canola | cytosol | 27.08 | 9.4 |
| Zm00001d007856_P001 | Maize | cytosol | 13.02 | 9.19 |
| Zm00001d051187_P009 | Maize | plastid | 33.33 | 9.08 |
| Zm00001d047020_P002 | Maize | cytosol | 20.31 | 8.86 |
| Zm00001d012827_P002 | Maize | cytosol | 19.27 | 8.79 |
| Zm00001d034885_P002 | Maize | cytosol | 18.75 | 8.65 |
| Zm00001d047793_P001 | Maize | extracellular, plasma membrane | 19.27 | 8.17 |
| Zm00001d028656_P001 | Maize | mitochondrion | 19.27 | 8.15 |
| Zm00001d030031_P002 | Maize | plastid | 19.79 | 7.87 |
| Zm00001d049871_P001 | Maize | cytosol | 5.21 | 5.24 |
| Zm00001d016547_P001 | Maize | cytosol, plastid | 13.54 | 4.89 |
| Zm00001d051030_P001 | Maize | cytosol, plastid | 13.54 | 4.89 |
| Zm00001d046873_P001 | Maize | cytosol, plastid | 13.54 | 4.89 |
| CDY08879 | Canola | cytosol | 4.17 | 2.54 |
| Zm00001d051188_P001 | Maize | cytosol | 1.56 | 2.27 |
| Zm00001d016932_P001 | Maize | endoplasmic reticulum | 0.52 | 0.55 |
| Zm00001d031462_P001 | Maize | endoplasmic reticulum, extracellular | 0.52 | 0.52 |
| Solyc12g042180.1.1 | Tomato | cytosol | 0.52 | 0.45 |
Protein Annotations
| Gene3D:3.30.40.160 | MapMan:35.1 | UniProt:A0A1D6EEN2 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf |
| GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 |
| GO:GO:0046872 | InterPro:IPR001164 | InterPro:IPR038508 | ProteinID:ONM18673.1 | ProteinID:ONM18674.1 | ProteinID:ONM18675.1 |
| ProteinID:ONM18676.1 | PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50115 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF242 |
| SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI0008451548 | EnsemblPlantsGene:Zm00001d004245 | EnsemblPlants:Zm00001d004245_P003 | EnsemblPlants:Zm00001d004245_T003 |
Description
ADP-ribosylation factor GTPase-activating protein AGD3
Coordinates
chr2:-:95654560..95664023
Molecular Weight (calculated)
21473.3 Da
IEP (calculated)
6.018
GRAVY (calculated)
-0.351
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPVEFEPSV SDDLVLEQKS GNGQHDVRGT HHHRTRMKPE KPIDLLRKVD GNNMCADCGA SEPDWASLNL GALLCIECSG VHRNLGVHIS MVRSLTHDVR
101: VWEPSVINLF QSLGNMFVNS IWEETLPDDN SSADGSDTSQ YLSISKPKHK DVFSAKEKFI HAKVFTTFTT AYIPLFFSNV WGVKNQIISS EE
101: VWEPSVINLF QSLGNMFVNS IWEETLPDDN SSADGSDTSQ YLSISKPKHK DVFSAKEKFI HAKVFTTFTT AYIPLFFSNV WGVKNQIISS EE
001: MHFTKLDDSP MFRKQLQSME ESAEILRERS LKFYKGCRKY TEGLGEAYDG DIAFASALET FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC
Arabidopsis Description
AGD3ADP-ribosylation factor GTPase-activating protein AGD3 [Source:UniProtKB/Swiss-Prot;Acc:Q5W7F2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.