Factsheet for HORVU7Hr1G055220.21

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G084970.2
HORVU5Hr1G077570.15
HORVU5Hr1G093460.2
HORVU7Hr1G008640.2
HORVU7Hr1G008670.5
HORVU7Hr1G055220.21

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13300.1	HORVU5Hr1G093460.2	AT3G63300.1	19363154
AT5G13300.1	HORVU5Hr1G077570.15	AT5G13300.1	15743878
AT5G13300.1	HORVU7Hr1G055220.21	AT5G13300.1	15743878
AT5G13300.1	HORVU7Hr1G008640.2	AT5G26980.1	15743878
AT5G13300.1	HORVU7Hr1G008670.5	AT5G26980.1	15743878
AT5G13300.1	HORVU1Hr1G084970.2	AT5G42080.1	15923323

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G263800.2	Wheat	cytosol	96.51	97.45
TraesCS7B01G161800.1	Wheat	endoplasmic reticulum	95.91	94.1
TraesCS7D01G264700.1	Wheat	endoplasmic reticulum	95.91	94.1
Zm00001d049872_P001	Maize	cytosol	56.32	85.25
OQU80812	Sorghum	cytosol	82.79	83.5
Zm00001d031667_P006	Maize	cytosol	81.95	82.75
Os08t0537600-01	Rice	plasma membrane	81.83	81.83
Zm00001d009353_P001	Maize	cytosol	11.55	79.34
Zm00001d015981_P001	Maize	peroxisome	14.32	77.78
CDX70496	Canola	cytosol	49.58	74.5
Solyc12g042180.1.1	Tomato	cytosol	19.98	74.11
HORVU5Hr1G077570.15	Barley	cytosol	74.37	73.84
Zm00001d049871_P001	Maize	cytosol	16.73	72.77
GSMUA_Achr11P...	Banana	cytosol	71.36	72.67
GSMUA_Achr4P00060_001	Banana	cytosol	70.52	70.01
Zm00001d004245_P003	Maize	cytosol	16.13	69.79
KRH45201	Soybean	cytosol	66.55	67.19
VIT_01s0150g00030.t01	Wine grape	cytosol	67.27	67.19
PGSC0003DMT400005756	Potato	cytosol	65.82	66.95
CDY09784	Canola	cytosol	64.26	66.92
Solyc05g023750.2.1	Tomato	cytosol	65.34	66.46
AT5G13300.1	Thale cress	cytosol	65.58	65.9
CDX69650	Canola	cytosol	64.86	65.25
Bra006193.1-P	Field mustard	cytosol	63.66	65.07
Bra008838.1-P	Field mustard	cytosol	64.62	65.01
CDX78515	Canola	cytosol	64.98	64.98
KRH01512	Soybean	cytosol	64.86	64.24
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	55.84	62.7
Solyc03g118260.1.1	Tomato	cytosol	58.36	60.62
AT5G61980.1	Thale cress	cytosol	60.29	60.51
VIT_17s0000g00310.t01	Wine grape	cytosol	60.17	60.46
CDY00242	Canola	cytosol	56.44	59.59
Bra010046.1-P	Field mustard	cytosol	56.44	59.29
Bra029295.1-P	Field mustard	cytosol	60.77	58.58
CDY30689	Canola	cytosol	60.65	58.47
KRH63858	Soybean	cytosol	54.87	58.09
KRH59741	Soybean	cytosol	54.39	56.5
CDX86943	Canola	cytosol	48.01	56.04
PGSC0003DMT400036762	Potato	cytosol	38.75	55.14
Solyc12g042170.1.1	Tomato	cytosol	35.62	54.61
Zm00001d015278_P001	Maize	mitochondrion	22.02	54.46
KRH54108	Soybean	cytosol	46.45	52.3
HORVU6Hr1G059210.10	Barley	cytosol, plastid	39.11	45.9
CDY53619	Canola	cytosol	17.45	43.03
Zm00001d023982_P001	Maize	cytosol	19.49	41.65
HORVU1Hr1G047800.23	Barley	plastid	7.1	17.46
HORVU5Hr1G123590.1	Barley	cytosol	7.82	13.35
HORVU4Hr1G059060.2	Barley	mitochondrion	8.06	11.63
CDY08879	Canola	cytosol	2.53	6.67

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:1.25.40.20	MapMan:22.3.4.1	Gene3D:3.30.40.160	UniProt:A0A287WK73	InterPro:AGD1/2/3/4_BAR_plant
InterPro:AH/BAR_dom_sf	InterPro:ARFGAP/RecO	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	InterPro:BAR_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	EnsemblPlantsGene:HORVU7Hr1G055220	EnsemblPlants:HORVU7Hr1G055220.21	InterPro:IPR001164
InterPro:IPR001849	InterPro:IPR002110	InterPro:IPR004148	InterPro:IPR020683	InterPro:IPR027267	InterPro:IPR036770
InterPro:IPR038508	PFAM:PF00169	PFAM:PF01412	PFAM:PF12796	PFAM:PF16746	InterPro:PH_domain
PRINTS:PR00405	PFscan:PS50003	PFscan:PS50088	PFscan:PS50115	PFscan:PS50297	PANTHER:PTHR23180
PANTHER:PTHR23180:SF242	SMART:SM00105	SMART:SM00233	SMART:SM00248	SMART:SM00721	SUPFAM:SSF103657
SUPFAM:SSF48403	SUPFAM:SSF50729	SUPFAM:SSF57863	UniParc:UPI000B469965	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:+:225590346..225599635

Molecular Weight (calculated)

93488.5 Da

IEP (calculated)

7.515

GRAVY (calculated)

-0.495

Length

831 amino acids

Sequence
(BLAST)

001: AGRPAAMYFA RLDDSPMFRT QIQSLEESAE VLRERCLKFH KGCRKYTEGL GEAYDGDIAF ASALETFGGG HNDPISVAFG GPVMSKFTIA LREIGTYKEV
101: LRSQQVEHML NDRLLNFVDV DLHDVKDARK RFDKASLVYD QIREKYLSLK KGTRADITTA IEEELHSARS AFEQARFNLV TAISHIEAKK RFEFLEAVSA
201: TMDSHLRYFK QGYELLHQME PYINQVLAYS QQSRERANKE QASLLERMHE YKKQIDRDSR LSGIGLSDSH NVDGIQTIGR SSHKMIEAVM QSSTKGKVQT
301: IRQGYLSKRS SNLRGDWKRR FFVLDSRGML YYYRKQINRP AGVCQVQRTN NTPEHGSGLL SRLFSSHYHG IHDEKSVARH TVNLLTSTIK VDAEQSDLRF
401: CFRIISPMKI YTLQAESALD QMDWIEKITG VIASLLSAQS PEQCLHSPRS CGHDRSASES SSYTSSVELE TSTSEDLTLE KNTGNGQHHH RTHIKPEKPI
501: DLLRRVDGNT ICADCGAAEP DWASLNLGAL LCIECSGVHR NLGVHISKVV RSLTLDVRVW EPSVINLFQS LGNMFVNRVW EETLPSSNNG SSIDNTSTNG
601: SQAAQYFTTS KPKHSDPFSA KEKFIHAKYA DKEFVRRHSI DEIHIAQQMW DSVTANDKKG VYSLIVASHA NVNLVYGQMA SGLFLNLGKA LVQEQPASPP
701: DGSPRFFDCN SHEKVSPRES LSPPSTSSHV DELDDRYEGF SLLHLACRVA DVGMVELLLQ YGASVNVSDS RGRMPLHHCI LKGRHLHAKL LLSRGANTHA
801: TDRDGRSALQ YAMDRSTSDE DMLALLEEHF R

Best Arabidopsis Sequence Match ( AT1G10870.1 )
(BLAST)

001: MATFINLEDS PMFQKQVCSL EGTADELKDR CQKLYKGVKK FMGTLGEASK GESAFAACLE EFGGGPDDPI SLSIGGPVIS KFINALRELA SYKEFLCSQV
101: EHVLLERLMN FISVDLQEAK ESRHRFDKAA HSYDQSREKF VSLKKNTRGE IVAELEEDLE NSKSTFEKSR FNLVNSLMTI EAKKKYEFLE SISAIMDAHL
201: RYFKLGYDLL NQLEPFIHQI LTYAQQSKEQ SKIEQDRLAR RIQEFRTQSE LDSQQLVANA ESSGANGNRV GGNIPYKNTE TSLTADKEVI KQGYLLKRSS
301: SLRTDWKRKF FVLDSHGSMY YYRTNGNKSM GSHHHYSGSS DHNTGVFGRF RARHNRSGSL TEGSLGYNTI DLRTSLIKLD AEDMDLRLCF RIISPQKTYT
401: LQAENGADRM DWVNKITKAI GTLLNSHFLQ QSPVRYLDKD NSSSAPANAV VSGDQIRHND SRQNIGDDVS TILRGLPGNN ACAECNAPEP DWASLNLGVL
501: LCIQCSGVHR NLGVHISKVR SLSLDVKVWE PTILDLFRNL GNVYCNSLWE GLLHLDDDCE DGSALSHASV SKPCPEDSFS VKEKYILGKY LEKALVIKDE
601: SEANLSAASR IWEAVQSRNI REIYRLIVTT GDVNIINTKF DDITDIDAYH HIDAAEKAVK KRHDPTVCQR IKESNEPRSC LQGCSLLHVA CHIGDSVLLE
701: LLLQFGADLN IRDYHGRTPL HHCISSGNHK FAKILLRRGA RPSIEDDGGL SVLERAMEMG AITDEELFLL LAECA

Arabidopsis Description

AGD4ARF-GAP domain 4 [Source:TAIR;Acc:AT1G10870]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.