CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54108	Soybean	cytosol	76.82	81.71
KRH59741	Soybean	cytosol	68.28	67.0
Zm00001d049872_P001	Maize	cytosol	42.68	61.02
KRH45201	Soybean	cytosol	61.15	58.32
KRH01512	Soybean	cytosol	60.25	56.38
GSMUA_Achr11P...	Banana	cytosol	58.09	55.88
TraesCS7A01G263800.2	Wheat	cytosol	57.83	55.16
HORVU7Hr1G055220.21	Barley	cytosol	58.09	54.87
Os08t0537600-01	Rice	plasma membrane	57.83	54.63
OQU80812	Sorghum	cytosol	57.32	54.61
GSMUA_Achr4P00060_001	Banana	cytosol	58.09	54.48
Zm00001d031667_P006	Maize	cytosol	56.69	54.07
TraesCS5A01G293000.1	Wheat	cytosol	57.2	54.03
TraesCS5B01G292200.1	Wheat	cytosol	57.32	53.96
Zm00001d009353_P001	Maize	cytosol	8.28	53.72
Os09t0510700-01	Rice	cytosol	57.2	53.71
TraesCS5D01G300300.2	Wheat	cytosol	57.07	53.33
Zm00001d021087_P003	Maize	cytosol	56.69	53.17
TraesCS7B01G161800.1	Wheat	endoplasmic reticulum	57.07	52.89
TraesCS7D01G264700.1	Wheat	endoplasmic reticulum	57.07	52.89
EER99172	Sorghum	cytosol	56.05	52.63
HORVU5Hr1G077570.15	Barley	cytosol	56.05	52.57
Zm00001d015981_P001	Maize	peroxisome	10.06	51.63
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	46.5	49.32
Zm00001d004245_P003	Maize	cytosol	11.21	45.83
Zm00001d015278_P001	Maize	mitochondrion	18.6	43.45
KRH29237	Soybean	cytosol	42.93	43.43
KRH24228	Soybean	cytosol	42.8	43.3
Zm00001d049871_P001	Maize	cytosol	8.41	34.55
KRH15700	Soybean	cytosol	7.77	31.44
Zm00001d023982_P001	Maize	cytosol	14.78	29.82
KRH38902	Soybean	cytosol	7.9	25.51
KRH09434	Soybean	cytosol	7.9	25.41
KRH41906	Soybean	cytosol	8.66	22.74
KRH27179	Soybean	cytosol	10.96	17.77
KRH22157	Soybean	cytosol	10.83	17.67
KRH26038	Soybean	cytosol	11.08	17.4
KRH55419	Soybean	cytosol	10.83	16.47
KRH75607	Soybean	cytosol	7.13	13.9
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	7.13	13.9
KRH19707	Soybean	cytosol	8.15	13.31
KRG95812	Soybean	endoplasmic reticulum	8.15	13.09
KRH67539	Soybean	mitochondrion	8.03	12.96
KRH32302	Soybean	mitochondrion	7.9	12.94
KRH30767	Soybean	nucleus	3.82	12.35

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:1.25.40.20	MapMan:22.3.4.1	Gene3D:3.30.40.160	EMBL:ACUP02002719	InterPro:AGD1/2/3/4_BAR_plant
InterPro:AH/BAR_dom_sf	InterPro:ARFGAP/RecO	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	InterPro:BAR_dom	ncoils:Coil	EnsemblPlantsGene:GLYMA_04G200800	GO:GO:0003674	GO:GO:0005096
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	UniProt:I1JXQ4	InterPro:IPR001164
InterPro:IPR001849	InterPro:IPR002110	InterPro:IPR004148	InterPro:IPR020683	InterPro:IPR027267	InterPro:IPR036770
InterPro:IPR038508	EnsemblPlants:KRH63858	ProteinID:KRH63858	ProteinID:KRH63858.1	PFAM:PF00169	PFAM:PF01412
PFAM:PF12796	PFAM:PF16746	InterPro:PH_domain	PRINTS:PR00405	PFscan:PS50003	PFscan:PS50088
PFscan:PS50115	PFscan:PS50297	PANTHER:PTHR23180	PANTHER:PTHR23180:SF374	SMART:SM00105	SMART:SM00233
SMART:SM00248	SMART:SM00721	SUPFAM:SSF103657	SUPFAM:SSF48403	SUPFAM:SSF50729	SUPFAM:SSF57863
UniParc:UPI0002951B93	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:47352498..47360512

Molecular Weight (calculated)

87908.3 Da

IEP (calculated)

7.599

GRAVY (calculated)

-0.440

Length

785 amino acids

Sequence
(BLAST)

001: MNFSKLNDSP MFRQQLQCME ESSESLRSRC FKFYKGCRKY TEGLGEAYDG DIAFASALEN FGGGHNDPLF VTLGGPVMTK FSIALREIST YKELLRSQAE
101: HMLNDRLLNM LNVDILDVKE ARRRFEKASL VHDQAREKFM SLRKSTRMDI ATIVEEDLHN ARSSFEEARF NLVSALHNVE AKKRFDFLEA VTGVMDAHLR
201: YYRQGYQLLQ EMEPFIIEVL AYTQKARESY NEEQISLCER MLEYKKHVHH ESMLSLNGPY GSPCRDGPVH PFSRISDKVA DAVTESAENG KVQIIRQGYL
301: SKRSSNLRGD WKRRYFVLDS RGMLYYFRKP WSGLNSGNQS SLHRNCATEN SAGILSRLLS SHYHGLIPDE KSVARHTVNL LTSTIKIDAE QSDLRFCFRI
401: ISPSKSYTLQ AENALDQMDW MEKITGVIAT LLSAQTLSDD SESGDSYSAN KTYLLKGSPD DDHAVSGDSI KNEKPIDVLR KVSGNDKCAD CGKPDPDWAS
501: LNLGILICIE CSGVHRNLGV HISKVRSLTL DVKVWDSAVL TMFQCLGNLF ANSVWEELLH STSTSQTDDT PDGSSKTHKK LFHARKPAHD DAISLKERFI
601: HAKYAAKVFV RRITNNNRLL STAQQVVESI SANDKKAVYR HIVKSEVNLN AIISGKAGFS SNTPSSINPN ISCESKTPQV EDIQDGSSVL HLACIISDSA
701: MVELLLQYGA DINAIDSRGR TPLHYSTMRG KNATARVLIT RGANPLAVDK EGNTPFKPAT EPDTAGKETL ALNQQIACPQ NLIEK

Best Arabidopsis Sequence Match ( AT5G61980.1 )
(BLAST)

001: MHFAKLDDSP MFRQQMQSME ESAELLRLRC LRFYKGCRKY TEGLGEGYDA DIGFVNALES FGGGHNDPVC VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HMLSDRLLQF VNGDVHEVKE ARKRFDKATI TYDQAREKYL SLRKSTRLDV AATIEEDLHS ARTTFEQARF HLVSALSNAE SKKRFEFLEA VSGTMDAHLR
201: FFKQGYELLH QMEPFINQVL AYAHQSRECA NYEMASLNER MQEYQRQVDR ETRNSCVSPT GDGMRHNSRN SQKVIEAVMQ SAAKGKVQTI RQGYLSKRSS
301: NLRGDWKRRF FILDSRGMLY YYRKPWNWSS GNGSRSVVHR NMASENSPGL LSRWLSSHYH GGVHDEKPVA RHTVNLLTST IKVDADQTDL RFCFRIISPT
401: KVYTLQAENA QDQMDWIEKI TGVIASLLSF QTPERAIMRL STVDGGDTFS ASDSGSLADP YDIEQAESGE STVEHPMTGG NRSRFSGCLQ QHDMVKTEKP
501: IDVLTRVLGN ERCADCGAPE PDWASLNLGV LICIECSGIH RNLGVHISKV RSLTLDVKVW EPSVLTLFQS LGNVYVNSVW EELLNSESRT SSASRSSGTP
601: KSDRPRKLLV RKPGFNDPIS VKELFIHAKY SERIFVRKAI DSQHFQAVFQ EIWENVRAND KKSVYRHIVC SEADVNALRG QASYTVSLPL SKMMQMEETL
701: EAKFKSIEEE FQENPAGYSN SRGDGESMVR EETSNDCSLL HLACLSADIG MVELLLQYGA KINATDSKGR TPLHHCIISR RYAIARLLLM RGGDPNAVDK
801: DSNIPVKYAS QTDLNDSELI ALLTDSKR

Arabidopsis Description

AGD1ADP-ribosylation factor GTPase-activating protein AGD1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.