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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • peroxisome 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
MultiLoc:peroxisome
PProwler:peroxisome
WoLF PSORT:peroxisome
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d004245_P003
Zm00001d009353_P001
Zm00001d009504_P002
Zm00001d013705_P001
Zm00001d013996_P003
Zm00001d015278_P001
Zm00001d015981_P001
Zm00001d021087_P003
Zm00001d023982_P001
Zm00001d030661_P001
Zm00001d031667_P006
Zm00001d033283_P001
Zm00001d038955_P001
Zm00001d039404_P001
Zm00001d045530_P001
Zm00001d049871_P001
Zm00001d049872_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G13300.1 Zm00001d013705_P001 AT3G63300.1 19363154
AT5G13300.1 Zm00001d030661_P001 AT3G63300.1 19363154
AT5G13300.1 Zm00001d033283_P001 AT3G63300.1 19363154
AT5G13300.1 Zm00001d004245_P003 AT5G13300.1 15743878
AT5G13300.1 Zm00001d009353_P001 AT5G13300.1 15743878
AT5G13300.1 Zm00001d015278_P001 AT5G13300.1 15743878
AT5G13300.1 Zm00001d015981_P001 AT5G13300.1 15743878
AT5G13300.1 Zm00001d021087_P003 AT5G13300.1 15743878
AT5G13300.1 Zm00001d023982_P001 AT5G13300.1 15743878
AT5G13300.1 Zm00001d031667_P006 AT5G13300.1 15743878
AT5G13300.1 Zm00001d049871_P001 AT5G13300.1 15743878
AT5G13300.1 Zm00001d049872_P001 AT5G13300.1 15743878
AT5G13300.1 Zm00001d013996_P003 AT5G26980.1 15743878
AT5G13300.1 Zm00001d039404_P001 AT5G26980.1 15743878
AT5G13300.1 Zm00001d045530_P001 AT5G26980.1 15743878
AT5G13300.1 Zm00001d009504_P002 AT5G42080.1 15923323
AT5G13300.1 Zm00001d038955_P001 AT5G42080.1 15923323
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d009353_P001 Maize cytosol 68.63 86.78
Zm00001d004245_P003 Maize cytosol 94.77 75.52
Zm00001d023982_P001 Maize cytosol 76.47 30.08
Zm00001d049872_P001 Maize cytosol 96.08 26.78
Zm00001d015278_P001 Maize mitochondrion 52.29 23.81
Zm00001d031667_P006 Maize cytosol 95.42 17.74
OQU80812 Sorghum cytosol 94.77 17.6
Os08t0537600-01 Rice plasma membrane 79.08 14.56
TraesCS7A01G263800.2 Wheat cytosol 77.78 14.46
HORVU7Hr1G055220.21 Barley cytosol 77.78 14.32
TraesCS7D01G264700.1 Wheat endoplasmic reticulum 78.43 14.17
TraesCS7B01G161800.1 Wheat endoplasmic reticulum 78.43 14.17
Solyc12g042170.1.1 Tomato cytosol 49.02 13.84
GSMUA_Achr7P22530_001 Banana endoplasmic reticulum 64.05 13.24
Zm00001d021087_P003 Maize cytosol 69.28 12.66
PGSC0003DMT400036762 Potato cytosol 47.06 12.33
GSMUA_Achr11P... Banana cytosol 65.36 12.25
Zm00001d032879_P001 Maize extracellular 16.99 11.98
GSMUA_Achr4P00060_001 Banana cytosol 64.05 11.71
CDY53619 Canola cytosol 24.84 11.28
CDX86943 Canola cytosol 51.63 11.1
PGSC0003DMT400005756 Potato cytosol 58.82 11.02
Solyc05g023750.2.1 Tomato cytosol 58.17 10.89
VIT_01s0150g00030.t01 Wine grape cytosol 57.52 10.58
KRH45201 Soybean cytosol 55.56 10.33
KRH01512 Soybean cytosol 56.21 10.25
KRH59741 Soybean cytosol 53.59 10.25
Bra010046.1-P Field mustard cytosol 52.94 10.24
Bra008838.1-P Field mustard cytosol 54.9 10.17
CDX69650 Canola cytosol 54.9 10.17
CDY00242 Canola cytosol 52.29 10.17
AT5G13300.1 Thale cress cytosol 54.9 10.16
VIT_17s0000g00310.t01 Wine grape cytosol 54.9 10.16
KRH63858 Soybean cytosol 51.63 10.06
AT5G61980.1 Thale cress cytosol 54.25 10.02
Bra006193.1-P Field mustard cytosol 52.94 9.96
CDX78515 Canola cytosol 53.59 9.87
CDY09784 Canola cytosol 50.33 9.65
Bra029295.1-P Field mustard cytosol 54.25 9.63
CDY30689 Canola cytosol 54.25 9.63
Zm00001d007856_P001 Maize cytosol 16.34 9.19
Zm00001d021802_P001 Maize cytosol 28.76 9.19
Zm00001d051187_P009 Maize plastid 41.83 9.08
Solyc03g118260.1.1 Tomato cytosol 46.41 8.88
Zm00001d006602_P001 Maize cytosol 28.76 8.87
CDX70496 Canola cytosol 30.07 8.32
KRH54108 Soybean cytosol 39.87 8.27
Zm00001d047020_P002 Maize cytosol 20.91 7.27
Zm00001d012827_P002 Maize cytosol 19.61 7.13
Zm00001d034885_P002 Maize cytosol 18.95 6.97
Zm00001d047793_P001 Maize extracellular, plasma membrane 20.26 6.84
Zm00001d028656_P001 Maize mitochondrion 20.26 6.83
Zm00001d030031_P002 Maize plastid 20.26 6.42
Zm00001d016547_P001 Maize cytosol, plastid 15.69 4.51
Zm00001d051030_P001 Maize cytosol, plastid 15.69 4.51
Zm00001d046873_P001 Maize cytosol, plastid 15.69 4.51
CDY08879 Canola cytosol 4.58 2.22
Solyc12g042180.1.1 Tomato cytosol 0.65 0.45
Zm00001d049871_P001 Maize cytosol 0.0 0.0
Zm00001d031462_P001 Maize endoplasmic reticulum, extracellular 0.0 0.0
Zm00001d016932_P001 Maize endoplasmic reticulum 0.0 0.0
Zm00001d051188_P001 Maize cytosol 0.0 0.0
Protein Annotations
Gene3D:3.30.40.160MapMan:35.1UniProt:A0A1D6H4U9ProteinID:AQK69848.1InterPro:ARFGAP/RecOInterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sfGO:GO:0003674GO:GO:0005096GO:GO:0005488GO:GO:0008150GO:GO:0030234
GO:GO:0043547GO:GO:0046872InterPro:IPR001164InterPro:IPR038508PFAM:PF01412PRINTS:PR00405
PFscan:PS50115PANTHER:PTHR23180PANTHER:PTHR23180:SF242SMART:SM00105SUPFAM:SSF57863UniParc:UPI000843C167
EnsemblPlantsGene:Zm00001d015981EnsemblPlants:Zm00001d015981_P001EnsemblPlants:Zm00001d015981_T001:::
Description
ADP-ribosylation factor GTPase-activating protein AGD3
Coordinates
chr5:+:136452942..136454620
Molecular Weight (calculated)
17159.4 Da
IEP (calculated)
6.720
GRAVY (calculated)
-0.437
Length
153 amino acids
Sequence
(BLAST)
001: MSPVEFQPSV SEDLVLEKKS GNGQHDVRGT HHHRTSMKPE KPIDLLRKVD EPDWASLNLG ALLCIECSGV HRNLGVHISK VRSLTLDVRV WEPSVINLFQ
101: SLGNMFVNSI WEEMLPDDNS SADGSDTSQY LSVSKPKHKD VFSAKEKFIH AKV
Best Arabidopsis Sequence Match ( AT5G13300.1 )
(BLAST)
001: MHFTKLDDSP MFRKQLQSME ESAEILRERS LKFYKGCRKY TEGLGEAYDG DIAFASALET FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC
Arabidopsis Description
AGD3ADP-ribosylation factor GTPase-activating protein AGD3 [Source:UniProtKB/Swiss-Prot;Acc:Q5W7F2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.