Factsheet for Zm00001d009504_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004245_P003
Zm00001d009353_P001
Zm00001d009504_P002
Zm00001d013323_P001
Zm00001d014297_P006
Zm00001d015278_P001
Zm00001d015981_P001
Zm00001d017979_P002
Zm00001d021087_P003
Zm00001d023982_P001
Zm00001d031667_P006
Zm00001d032256_P001
Zm00001d033919_P001
Zm00001d035331_P001
Zm00001d037279_P005
Zm00001d038955_P001
Zm00001d044757_P006
Zm00001d049871_P001
Zm00001d049872_P001
Zm00001d051815_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42080.1	Zm00001d013323_P001	AT1G08560.1	19959995
AT5G42080.1	Zm00001d033919_P001	AT1G08560.1	19959995
AT5G42080.1	Zm00001d035331_P001	AT1G08560.1	19959995
AT5G42080.1	Zm00001d017979_P002	AT1G59610.1	20231465
AT5G42080.1	Zm00001d032256_P001	AT1G59610.1	20231465
AT5G42080.1	Zm00001d037279_P005	AT1G59610.1	20231465
AT5G42080.1	Zm00001d044757_P006	AT1G59610.1	20231465
AT5G42080.1	Zm00001d051815_P002	AT1G59610.1	20231465
AT5G42080.1	Zm00001d004245_P003	AT5G13300.1	15923323
AT5G42080.1	Zm00001d009353_P001	AT5G13300.1	15923323
AT5G42080.1	Zm00001d015278_P001	AT5G13300.1	15923323
AT5G42080.1	Zm00001d015981_P001	AT5G13300.1	15923323
AT5G42080.1	Zm00001d021087_P003	AT5G13300.1	15923323
AT5G42080.1	Zm00001d023982_P001	AT5G13300.1	15923323
AT5G42080.1	Zm00001d031667_P006	AT5G13300.1	15923323
AT5G42080.1	Zm00001d049871_P001	AT5G13300.1	15923323
AT5G42080.1	Zm00001d049872_P001	AT5G13300.1	15923323
AT5G42080.1	Zm00001d014297_P006	AT5G35750.1	18642946
AT5G42080.1	Zm00001d009504_P002	AT5G42080.1	19144001
AT5G42080.1	Zm00001d038955_P001	AT5G42080.1	19144001
AT5G42080.1	Zm00001d009504_P002	AT5G42080.1	20231465
AT5G42080.1	Zm00001d038955_P001	AT5G42080.1	20231465

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0556100-01	Rice	plasma membrane	87.8	94.58
Zm00001d038955_P001	Maize	cytosol, mitochondrion, plasma membrane	96.19	94.18
TraesCS1B01G411700.3	Wheat	cytosol	85.98	92.61
TraesCS1A01G385400.2	Wheat	cytosol, golgi, nucleus, unclear	85.67	92.28
TraesCS1D01G393000.2	Wheat	cytosol	85.67	92.28
GSMUA_Achr8P27540_001	Banana	cytosol	82.32	88.67
VIT_02s0025g01570.t01	Wine grape	cytosol, extracellular	81.1	87.36
GSMUA_Achr6P26600_001	Banana	cytosol	81.1	87.36
KRH60047	Soybean	endoplasmic reticulum	79.42	85.41
KRH41321	Soybean	endoplasmic reticulum, nucleus	79.42	85.41
Solyc05g050600.2.1	Tomato	nucleus, plastid	79.27	85.39
CDX67529	Canola	cytosol	78.81	84.75
Bra028525.1-P	Field mustard	cytosol	78.66	84.59
PGSC0003DMT400000646	Potato	cytosol	78.51	84.43
Solyc01g095970.2.1	Tomato	plastid	78.35	84.26
CDY27661	Canola	cytosol	78.35	84.26
CDY13364	Canola	cytosol	78.35	84.26
CDY25074	Canola	cytosol	78.2	84.1
CDX67862	Canola	cytosol	78.2	84.1
Bra003469.1-P	Field mustard	cytosol	73.63	84.0
KRH77654	Soybean	endoplasmic reticulum	78.05	83.93
AT3G61760.1	Thale cress	cytosol	78.05	83.93
AT5G42080.1	Thale cress	cytosol	77.9	83.77
CDX99702	Canola	cytosol	77.9	83.77
Bra025448.1-P	Field mustard	cytosol	74.39	83.7
KRH27831	Soybean	cytosol, endoplasmic reticulum, nucleus	77.74	83.61
HORVU1Hr1G084970.2	Barley	plasma membrane	86.13	83.58
KRH47905	Soybean	cytosol, endoplasmic reticulum	76.68	82.59
KRH06461	Soybean	cytosol	60.98	77.07
Zm00001d013426_P002	Maize	plasma membrane	63.87	68.58
Zm00001d033751_P003	Maize	plasma membrane	63.57	68.25
Zm00001d005306_P002	Maize	cytosol, extracellular, mitochondrion	61.59	64.33
Zm00001d030005_P002	Maize	cytosol, mitochondrion	38.87	63.43
Zm00001d042338_P002	Maize	extracellular, mitochondrion	34.45	27.66
Zm00001d012027_P002	Maize	cytosol	34.45	26.59
Zm00001d028495_P001	Maize	cytosol	23.63	23.0
Zm00001d028497_P001	Maize	cytosol	18.75	19.71
Zm00001d017979_P002	Maize	extracellular, mitochondrion	26.37	18.78
Zm00001d037279_P005	Maize	plasma membrane	25.91	18.62
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	25.91	18.62
Zm00001d004012_P001	Maize	cytosol	30.64	18.37
Zm00001d032256_P001	Maize	cytosol	24.7	17.42
Zm00001d043451_P001	Maize	plastid	19.97	15.92
Zm00001d023583_P005	Maize	plastid	17.68	15.3
Zm00001d012752_P006	Maize	plastid	19.21	15.02
Zm00001d051815_P002	Maize	cytosol	9.76	11.66

Protein Annotations

Gene3D:1.20.120.1240	MapMan:22.1.7.1	UniProt:A0A1D6FJS7	ProteinID:AQK92016.1	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS
InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom
InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212
PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF138
SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00084305F7	EnsemblPlantsGene:Zm00001d009504
EnsemblPlants:Zm00001d009504_P002	EnsemblPlants:Zm00001d009504_T002	:	:	:	:

Description

Dynamin protein 1A

Coordinates

chr8:-:67753774..67762948

Molecular Weight (calculated)

73844.2 Da

IEP (calculated)

8.580

GRAVY (calculated)

-0.274

Length

656 amino acids

Sequence
(BLAST)

001: MDNLITLVNK LQRACTALGD HGEESALPTL WDSLPAIAVV GGQVPVFPSM ARFFVLVLIG SGAVTPASWG WISRVAGGGT AMSSGKSSVL ESVVGKDFLP
101: RGSGIVTRRP LVLQLHRIDG DREYAEFMHL PRKRFTDFAA VRKEIADETD RETGRSKQIS PVPIHLSIFS PYVVNLTLID LPGLTKVAVE GQPENIVQDI
201: ENMVRSYIEK PNCIILAVSP ANQDLATSDA IKISREVDPK GERTFGVLTK IDLMDKGTDA VDILEGRSYR LQTPWVGVVN RSQQDINKNV DMIAARRRER
301: EYFATTPEYK HMASRMGSEY LGKMLSKHLE QVIKSRIPGI QSLITKTIAE LETELNRLGK PIANDAGGKL YTIMEICRMF DSIYKEHLDG VYVPNNIFRR
401: PGGEKVYHVF DNQFPVAIKR LQFDKQLSME NVKKLITEAD GYQPHLIAPE QGYRRLIESC LISIRGPAEA AVDAVHAILK DLVRKAINET HELKQFPTLR
501: VEVGNAAFES LDRMRDESKK NTLKLVDMEC SYLTVDFFRK LPQDVERGGN PSHSIFDRYN DSYLRRIGQT VLSYVNMVCS TLRNSIPKSI VYCQVREAKR
601: SLLDHFFTEL GAREMKQLSK LLDEDPAVME RRTNLAKRLE LYRSAQSEID AVAWSK

Best Arabidopsis Sequence Match ( AT5G42080.1 )
(BLAST)

001: MENLISLVNK IQRACTALGD HGDSSALPTL WDSLPAIAVV GGQSSGKSSV LESIVGKDFL PRGSGIVTRR PLVLQLQKID DGTREYAEFL HLPRKKFTDF
101: AAVRKEIQDE TDRETGRSKA ISSVPIHLSI YSPNVVNLTL IDLPGLTKVA VDGQSDSIVK DIENMVRSYI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PSGDRTFGVL TKIDLMDKGT DAVEILEGRS FKLKYPWVGV VNRSQADINK NVDMIAARKR EREYFSNTTE YRHLANKMGS EHLAKMLSKH LERVIKSRIP
301: GIQSLINKTV LELETELSRL GKPIAADAGG KLYSIMEICR LFDQIFKEHL DGVRAGGEKV YNVFDNQLPA ALKRLQFDKQ LAMDNIRKLV TEADGYQPHL
401: IAPEQGYRRL IESSIVSIRG PAEASVDTVH AILKDLVHKS VNETVELKQY PALRVEVTNA AIESLDKMRE GSKKATLQLV DMECSYLTVD FFRKLPQDVE
501: KGGNPTHSIF DRYNDSYLRR IGSNVLSYVN MVCAGLRNSI PKSIVYCQVR EAKRSLLDHF FAELGTMDMK RLSSLLNEDP AIMERRSAIS KRLELYRAAQ
601: SEIDAVAWSK

Arabidopsis Description

DRP1ARSW9 [Source:UniProtKB/TrEMBL;Acc:A0A178UEJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.