Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU78880 | Sorghum | cytosol | 88.93 | 86.04 |
| TraesCS6B01G175300.1 | Wheat | cytosol | 66.11 | 64.38 |
| TraesCS6A01G147100.1 | Wheat | cytosol | 66.11 | 64.38 |
| HORVU6Hr1G028850.1 | Barley | cytosol | 65.1 | 63.4 |
| TraesCS6D01G136400.1 | Wheat | cytosol | 64.77 | 63.07 |
| Os12t0192300-00 | Rice | plasma membrane | 62.75 | 53.74 |
| GSMUA_Achr1P25170_001 | Banana | cytosol | 28.86 | 35.1 |
| Zm00001d033919_P001 | Maize | plasma membrane | 33.56 | 31.95 |
| Zm00001d013323_P001 | Maize | cytosol | 33.56 | 31.85 |
| Solyc06g053760.2.1 | Tomato | cytosol | 29.53 | 28.3 |
| KRH08461 | Soybean | cytosol | 30.54 | 28.26 |
| KRH70119 | Soybean | cytosol | 29.53 | 27.67 |
| PGSC0003DMT400041982 | Potato | cytosol | 28.86 | 27.65 |
| Zm00001d034365_P001 | Maize | plasma membrane | 28.19 | 27.45 |
| VIT_04s0008g02770.t01 | Wine grape | cytosol | 28.19 | 27.01 |
| Zm00001d053607_P001 | Maize | cytosol | 27.85 | 26.52 |
| CDX97497 | Canola | cytosol | 26.51 | 26.07 |
| CDX93553 | Canola | cytosol | 26.85 | 26.06 |
| Zm00001d046482_P001 | Maize | cytosol | 26.85 | 25.89 |
| AT1G08560.1 | Thale cress | cytosol | 26.85 | 25.81 |
| Bra018615.1-P | Field mustard | cytosol | 26.51 | 25.73 |
| CDY31137 | Canola | cytosol | 26.17 | 25.66 |
| Zm00001d007902_P001 | Maize | mitochondrion, plasma membrane | 26.17 | 25.66 |
| Bra030733.1-P | Field mustard | cytosol | 26.17 | 25.66 |
| Zm00001d036931_P001 | Maize | cytosol | 26.51 | 25.57 |
| Zm00001d013114_P001 | Maize | cytosol, plastid | 24.83 | 25.34 |
| CDX95050 | Canola | cytosol | 25.84 | 25.08 |
| Zm00001d041716_P002 | Maize | cytosol | 24.16 | 22.71 |
| Zm00001d021664_P001 | Maize | cytosol | 26.85 | 22.47 |
| Zm00001d018867_P002 | Maize | plastid | 26.51 | 20.2 |
| Zm00001d013115_P001 | Maize | cytosol | 9.4 | 19.18 |
Protein Annotations
| Gene3D:1.20.58.70 | MapMan:22.7.1.1 | UniProt:A0A1D6LFH1 | ProteinID:AQK78690.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016192 | GO:GO:0061025 | InterPro:IPR000727 | PFAM:PF00804 | ScanProsite:PS00914 |
| PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF155 | SMART:SM00397 | InterPro:SNARE | SUPFAM:SSF47661 |
| InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI000221CB69 | EnsemblPlantsGene:Zm00001d035331 |
| EnsemblPlants:Zm00001d035331_P001 | EnsemblPlants:Zm00001d035331_T001 | SEG:seg | : | : | : |
Description
Syntaxin-132
Coordinates
chr6:+:21637975..21638871
Molecular Weight (calculated)
31031.3 Da
IEP (calculated)
5.863
GRAVY (calculated)
0.004
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLMTDSFV AAAAKAQQGG AVAPAGGDDP ELGAFLAEVD AAKTEMIALR DELSHLRSAH EASKNAVVGS GEGRAATQAA LVRLLVSARR LRARLASMDR
101: RAPAPAAQTA AGLRGRVRDL TADVQALRRQ VSEERRSDAA RRYLAVAGDA PTEEQLDRLL ASTDGSSDAA MRAALLSAAG AEQDEAAKEV AEVERGLLEL
201: QQLFLDMAAL VEVQGAPLDD IEQQVGTAAG HVGAAEAELR EARRLQGAAR RRRVCLAGGI TALLLVGVAV AVLVALMLAR RGAGGKLVLQ LAMDLPAR
101: RAPAPAAQTA AGLRGRVRDL TADVQALRRQ VSEERRSDAA RRYLAVAGDA PTEEQLDRLL ASTDGSSDAA MRAALLSAAG AEQDEAAKEV AEVERGLLEL
201: QQLFLDMAAL VEVQGAPLDD IEQQVGTAAG HVGAAEAELR EARRLQGAAR RRRVCLAGGI TALLLVGVAV AVLVALMLAR RGAGGKLVLQ LAMDLPAR
001: MNDLMTKSFM SYVDLKKAAM KDMEAGPDFD LEMASTKADK MDENLSSFLE EAEYVKAEMG LISETLARIE QYHEESKGVH KAESVKSLRN KISNEIVSGL
101: RKAKSIKSKL EEMDKANKEI KRLSGTPVYR SRTAVTNGLR KKLKEVMMEF QGLRQKMMSE YKETVERRYF TVTGEHANDE MIEKIITDNA GGEEFLTRAI
201: QEHGKGKVLE TVVEIQDRYD AAKEIEKSLL ELHQVFLDMA VMVESQGEQM DEIEHHVINA SHYVADGANE LKTAKSHQRN SRKWMCIGII VLLLIILIVV
301: IPIITSFSSS
101: RKAKSIKSKL EEMDKANKEI KRLSGTPVYR SRTAVTNGLR KKLKEVMMEF QGLRQKMMSE YKETVERRYF TVTGEHANDE MIEKIITDNA GGEEFLTRAI
201: QEHGKGKVLE TVVEIQDRYD AAKEIEKSLL ELHQVFLDMA VMVESQGEQM DEIEHHVINA SHYVADGANE LKTAKSHQRN SRKWMCIGII VLLLIILIVV
301: IPIITSFSSS
Arabidopsis Description
KNSYP111 [Source:UniProtKB/TrEMBL;Acc:A0A178WAC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.