Factsheet for Zm00001d043381_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74161	Canola	mitochondrion	48.35	45.36
HORVU1Hr1G044880.1	Barley	mitochondrion, plastid	51.65	44.34
Zm00001d011741_P001	Maize	plastid	60.44	40.15
Zm00001d039246_P001	Maize	mitochondrion	52.75	40.0
Zm00001d043606_P001	Maize	mitochondrion	58.24	38.69
Zm00001d016276_P002	Maize	cytosol, mitochondrion	57.14	37.96
HORVU2Hr1G055560.3	Barley	cytosol, mitochondrion	57.14	37.14
Zm00001d036985_P001	Maize	mitochondrion, plastid	54.95	36.5
GSMUA_AchrUn_...	Banana	mitochondrion	47.25	34.68
GSMUA_Achr4P30950_001	Banana	mitochondrion	47.25	34.68
CDY21104	Canola	mitochondrion	50.55	34.59
Bra040415.1-P	Field mustard	mitochondrion	50.55	34.59
CDX80683	Canola	mitochondrion	50.55	34.59
CDX86189	Canola	mitochondrion	50.55	34.59
Bra040115.1-P	Field mustard	mitochondrion	50.55	34.59
Bra036117.1-P	Field mustard	mitochondrion	50.55	34.59
Bra009989.1-P	Field mustard	mitochondrion	50.55	34.59
CDY00010	Canola	extracellular	50.55	34.59
CDY05587	Canola	mitochondrion	50.55	34.59
CDY59816	Canola	mitochondrion	50.55	34.59
CDY52499	Canola	mitochondrion	50.55	34.59
CDY50766	Canola	mitochondrion	50.55	34.59
CDY41909	Canola	mitochondrion	50.55	34.59
CDY30024	Canola	mitochondrion	50.55	34.59
KRH04217	Soybean	mitochondrion	28.57	34.21
AT3G04920.1	Thale cress	mitochondrion	49.45	33.83
AT5G28060.1	Thale cress	mitochondrion	48.35	33.08
Solyc01g097870.2.1	Tomato	mitochondrion	48.35	33.08
PGSC0003DMT400049836	Potato	mitochondrion	47.25	32.33
PGSC0003DMT400051640	Potato	extracellular	47.25	32.33
Solyc06g084230.2.1	Tomato	endoplasmic reticulum, unclear	47.25	32.33
Solyc09g065330.2.1	Tomato	nucleus	47.25	32.33
KRH68706	Soybean	endoplasmic reticulum	48.35	32.12
KRG96941	Soybean	nucleus	48.35	32.12
GSMUA_Achr6P05510_001	Banana	mitochondrion	48.35	31.88
KRH34063	Soybean	mitochondrion	47.25	31.39
GSMUA_Achr9P28760_001	Banana	mitochondrion	47.25	31.16
GSMUA_Achr2P15660_001	Banana	mitochondrion	47.25	31.16
KRH04214	Soybean	cytosol	32.97	30.93
KRG92744	Soybean	mitochondrion	46.15	30.43
VIT_14s0030g01620.t01	Wine grape	mitochondrion	45.05	29.93
VIT_07s0151g00900.t01	Wine grape	mitochondrion	43.96	29.2
KRH64028	Soybean	mitochondrion	30.77	20.29
GSMUA_Achr8P20160_001	Banana	mitochondrion	21.98	10.1

Protein Annotations

Gene3D:3.30.70.3370	MapMan:35.1	UniProt:A0A1D6NB02	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	ProteinID:ONM37718.1
PFAM:PD006052	PFAM:PF01282	PANTHER:PTHR10496	PANTHER:PTHR10496:SF9	InterPro:Ribosomal_L23/L15e_core_dom_sf	InterPro:Ribosomal_S24e
SUPFAM:SSF54189	UniParc:UPI0008456843	EnsemblPlantsGene:Zm00001d043381	EnsemblPlants:Zm00001d043381_P001	EnsemblPlants:Zm00001d043381_T001	:

Description

40S ribosomal protein S24-1

Coordinates

chr3:+:198263246..198263770

Molecular Weight (calculated)

10588.3 Da

IEP (calculated)

9.820

GRAVY (calculated)

0.080

Length

91 amino acids

Sequence
(BLAST)

1: MAQQRMVLEV IHLDHANVSK MELKERLAKM YKVKDRNTIF VFKFRAGSTG SGLIYDNLDS KKFEPKYCLI WVCCRLALPF VACRYNVLIL G

Best Arabidopsis Sequence Match ( AT5G28060.1 )
(BLAST)

001: MAEKAVTIRT RNFMTNRLLA RKQFVIDVLH PGRANVSKAE LKEKLARMYE VKDPNAIFCF KFRTHFGGGK SSGYGLIYDT VENAKKFEPK YRLIRNGLDT
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDT KKK

Arabidopsis Description

RPS24B40S ribosomal protein S24-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC83]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.