CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34063	Soybean	mitochondrion	64.49	64.96
KRG92744	Soybean	mitochondrion	64.49	64.49
PGSC0003DMT400049836	Potato	mitochondrion	61.59	63.91
PGSC0003DMT400051640	Potato	extracellular	61.59	63.91
Solyc06g084230.2.1	Tomato	endoplasmic reticulum, unclear	61.59	63.91
Solyc09g065330.2.1	Tomato	nucleus	61.59	63.91
KRG96941	Soybean	nucleus	61.59	62.04
KRH68706	Soybean	endoplasmic reticulum	61.59	62.04
VIT_14s0030g01620.t01	Wine grape	mitochondrion	60.87	61.31
KRH04217	Soybean	mitochondrion	33.33	60.53
CDY50766	Canola	mitochondrion	57.25	59.4
AT3G04920.1	Thale cress	mitochondrion	57.25	59.4
CDY59816	Canola	mitochondrion	57.25	59.4
CDY41909	Canola	mitochondrion	57.25	59.4
CDY30024	Canola	mitochondrion	57.25	59.4
CDY21104	Canola	mitochondrion	57.25	59.4
CDY00010	Canola	extracellular	57.25	59.4
CDX86189	Canola	mitochondrion	57.25	59.4
CDX80683	Canola	mitochondrion	57.25	59.4
Bra040115.1-P	Field mustard	mitochondrion	57.25	59.4
Bra036117.1-P	Field mustard	mitochondrion	57.25	59.4
Bra009989.1-P	Field mustard	mitochondrion	57.25	59.4
CDY52499	Canola	mitochondrion	56.52	58.65
CDY05587	Canola	mitochondrion	56.52	58.65
Bra040415.1-P	Field mustard	mitochondrion	56.52	58.65
AT5G28060.1	Thale cress	mitochondrion	55.07	57.14
CDX74161	Canola	mitochondrion	39.86	56.7
GSMUA_Achr6P05510_001	Banana	mitochondrion	56.52	56.52
GSMUA_AchrUn_...	Banana	mitochondrion	50.72	56.45
GSMUA_Achr9P28760_001	Banana	mitochondrion	55.8	55.8
GSMUA_Achr2P15660_001	Banana	mitochondrion	55.8	55.8
Zm00001d016276_P002	Maize	cytosol, mitochondrion	53.62	54.01
Os01t0723200-01	Rice	nucleus	53.62	53.62
Zm00001d039246_P001	Maize	mitochondrion	46.38	53.33
Zm00001d011741_P001	Maize	plastid	52.9	53.28
GSMUA_Achr4P30950_001	Banana	mitochondrion	47.83	53.23
Os06t0555400-01	Rice	cytosol, mitochondrion	44.2	53.04
TraesCS3A01G286000.1	Wheat	cytosol, mitochondrion	52.9	52.9
TraesCS3B01G320300.1	Wheat	cytosol, mitochondrion	52.9	52.9
Os02t0229000-01	Rice	nucleus	52.9	52.9
Zm00001d043606_P001	Maize	mitochondrion	52.17	52.55
Zm00001d036985_P001	Maize	mitochondrion, plastid	52.17	52.55
TraesCS7D01G366400.1	Wheat	cytosol, mitochondrion	52.17	52.55
TraesCS6B01G234000.1	Wheat	golgi, unclear	52.17	52.55
TraesCS7B01G271400.1	Wheat	cytosol, mitochondrion	52.17	52.55
EES06539	Sorghum	mitochondrion, plastid	52.17	52.55
EES03542	Sorghum	mitochondrion	52.17	52.55
EER88512	Sorghum	mitochondrion	52.17	52.55
TraesCS3D01G285800.1	Wheat	cytosol, mitochondrion	52.17	52.17
TraesCS7A01G356300.1	Wheat	golgi, nucleus, unclear	51.45	51.82
TraesCS6D01G177000.1	Wheat	mitochondrion, plastid	52.17	50.0
HORVU3Hr1G068610.1	Barley	mitochondrion	49.28	49.63
HORVU1Hr1G044880.1	Barley	mitochondrion, plastid	36.96	48.11
KRH04214	Soybean	cytosol	33.33	47.42
HORVU7Hr1G088580.1	Barley	mitochondrion, plastid	51.45	41.76
HORVU6Hr1G044840.1	Barley	plasma membrane	51.45	39.89
HORVU2Hr1G055560.3	Barley	cytosol, mitochondrion	36.23	35.71
Zm00001d043381_P001	Maize	cytosol	20.29	30.77
GSMUA_Achr8P20160_001	Banana	mitochondrion	32.61	22.73

Protein Annotations

MapMan:17.1.3.1.25	Gene3D:3.30.70.3370	UniProt:A0A0R0KAX3	EMBL:ACUP02002737	ncoils:Coil	EnsemblPlantsGene:GLYMA_04G211900
GO:GO:0000462	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006139	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022627
GO:GO:0030529	EnsemblPlants:KRH64028	ProteinID:KRH64028	ProteinID:KRH64028.1	PFAM:PD006052	PFAM:PF01282
ScanProsite:PS00529	PANTHER:PTHR10496	PANTHER:PTHR10496:SF9	InterPro:Ribosomal_L23/L15e_core_dom_sf	InterPro:Ribosomal_S24e	InterPro:Ribosomal_S24e_CS
SUPFAM:SSF54189	UniParc:UPI00023C0027	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:48380836..48382078

Molecular Weight (calculated)

16569.7 Da

IEP (calculated)

10.596

GRAVY (calculated)

-0.548

Length

138 amino acids

Sequence
(BLAST)

001: MADKVVTIRT KKFMTNRLLS KKQFISNLCH YEREPLDPYQ QILLGFYRRA NLLFEKLGRM YDMKDTKIVF VFKFQPHFGG GKSIGFGLIY DSVENAKKYE
101: PKYRFIKNGL DTKVEKLRKQ MKERKNMTKL LYMSYKLL

Best Arabidopsis Sequence Match ( AT5G28060.1 )
(BLAST)

001: MAEKAVTIRT RNFMTNRLLA RKQFVIDVLH PGRANVSKAE LKEKLARMYE VKDPNAIFCF KFRTHFGGGK SSGYGLIYDT VENAKKFEPK YRLIRNGLDT
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDT KKK

Arabidopsis Description

RPS24B40S ribosomal protein S24-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC83]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.